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3.E.1.8.3
Homologue of anion-specific light-gated channel rhodopsin of 461 aas and 7 putative TMSs, lacking apparent channel activity  (Govorunova et al. 2015).

Accession Number:L1JUU4
Protein Name:Uncharacterized protein
Length:461
Molecular Weight:51474.00
Species:Guillardia theta CCMP2712 [905079]
Number of TMSs:4
Substrate Unknown

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MSVVYGEWAA QNPSCVTLSN IDLGVRTFEL CWGIMCACQA VFFALRYPRG TWEFVLVPLT 
61:	ECFVYGLGYS EIGYILLWDG RQVLWTRTVL WLATVPIILN QINGMAAVRI YGVDLNVMQM 
121:	YFSTLMICFG HTAALTHNQS LKWLFFIIAM AIFGLICFIN YHTFTAAEKH YKESGSEIDL 
181:	IIAKRIRLLA VIFFTSWTMY PLFFVLSVEG ACVASESVIL VCFALADLLS KNVFGVLFWD 
241:	TLWNLQDGKW SSYGTVTFFK TTDSVTKTAI STAMEEEFAK QKASRSDNPP AQYPFALPDA 
301:	ENSIEQELSQ LKQMNHTMMA TRQFSSLDHL NDFEHSDQRY APGVNAMPNG SPGSAGSQGV 
361:	ENPVQLSAIT KTGAIHSMDD VVDHVRSLNQ ALSDLLVTDD QPIRPPRRSN VGSTQPTGLT 
421:	GSENSTTGMY NVNTTPVLHS FTRNSFVRNS QTESPAPEYL R