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4.A.1.2.16
PTS beta-glucoside transporter, EIIBCA of 647 aas and 10 predicted TMSs (Francl et al. 2010).

Accession Number:ART98386
Protein Name:ART98386.1 PTS beta-glucoside transporter subunit EIIBCA [Lactobacillus gasseri]
Length:648
Molecular Weight:
Species:Lactobacillus gasseri [1596]
Number of TMSs:10
Substrate beta glucosides

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MDHKKVAETV IEAVGRDNLV AAAHCATRLR LVLKDDSKVN MKMLDSDPDI KGTFKTNGQF 
61:	QIIIGPGDVN NVYDELIKMT GLSELSTDDL KKVAQKDQKF NPVMAFIKLL SDIFVPIIPA 
121:	LVAGGLLMAL NNFLTSPGLF GAKSVVQMAP NVKGLSEIIQ VMSAAPFIFM PILVGMSAAK 
181:	RFGANQFLGA TIGMIMTTPA LGGAGKYWDI FGLHVSQTNY QYQVIPVLVA VWLLAFLEKR 
241:	FHKWLPSAVD FTFTPLLSIM ITGFLTFTII GPVFKGVSDA ITAAIVWLYN TTGAFGMGIF 
301:	GLSYSAIVTT GLHQSFPAVE TQLLAEYARG RGSGDFIFVT ACMANVAQGA ATFAVYFLTK 
361:	NEKVKGLASS SGVSALLGIT EPALFGVNLK YKFPFFCALI GAGVGAAFAG LMHVTAAALG 
421:	SAGFLGFLSM VPKSIPMWAL SVAISFIVAF ALTFVYGKRH FKEDVVEESG TVESAGDQVA 
481:	QQEKADQIIK EDKELHDEVI AAPVSGKAES LKDVKDPVFS TEAMGKGAAM VPSEGTIYSP 
541:	VTGEITVAYE TKHAYGIKSD EGAEVLIHIG IDTVNMKGEG FTSDVKQGQH VEKGEKLGTV 
601:	DLDAVNKAGY DTTVMTVITN TASYANVQRI DGVDKKHGDD LIAVTKR