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5.A.1.2.3
Cytochrome c biogenesis protein, CcdA

Accession Number:Q8PY72
Protein Name:Cytochrome c-type biogenesis protein
Length:216
Molecular Weight:22703.00
Species:Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) [192952]
Number of TMSs:6
Substrate Electrons

Cross database links:

HEGENOM: HBG733703
Entrez Gene ID: 1479334   
Pfam: PF02683   
KEGG: mma:MM_0992   

Gene Ontology

GO:0016020 C:membrane
GO:0017004 P:cytochrome complex assembly
GO:0055114 P:oxidation-reduction process

References (1)

[1] “The genome of Methanosarcina mazei: evidence for lateral gene transfer between Bacteria and Archaea.”  Deppenmeier U.et.al.   12125824

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSYEAISPVV AFGAGVLSIL SPCILPLLPA VLASSTGKGK LRPLAIVLGV TISFTVMGIV 
61:	TSAFGAAFQA YTTQLKILAE ILIIAMGIAM IFEIGLFNAF AKFPLLAGMN DKGPVSGLLL 
121:	GLSLGVLWIP CVGPILASIL TMVALEGSTV NGAITLMIYS AGFAVPMLLL AYSAQFSTSK 
181:	IKLISKYDAA LKKGAGVVLI LVGLWMVYQN HFWWLF