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8.A.1.1.2
The MFP cluster 1 protein, FarA (efflux of antimicrobial long chain fatty acids (Lee et al., 2006); functions with MFS carrier, FarB (TC# 2.A.1.3.20))

Accession Number:Q9RQ30
Protein Name:Efflux pump protein FarA
Length:394
Molecular Weight:42528.00
Species:Neisseria gonorrhoeae [485]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Golgi apparatus membrane1 / Multi-pass membrane protein2
Substrate NONE

Cross database links:

Pfam: PF00529   

Gene Ontology

GO:0016020 C:membrane
GO:0008565 F:protein transporter activity
GO:0009306 P:protein secretion

References (1)

[1] “The farAB-encoded efflux pump mediates resistance of gonococci to long-chained antibacterial fatty acids.”  Lee E.H.et.al.   10447892

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKSGNSEPNL METHTDETKL QNTQVKRKRR LTALTLLFAL SAAAAGSAFF LWWQHEEETE 
61:	DAYVAGRVVQ VTPQKGGTVR KVLHDDTDAV KKGDVLAVLD DDNDVLAYER AKNELVQAVR 
121:	QNRRQNAATS QAGAQVALRR ADLARAQDDL RRRSALAESG AVSAEELAHA RTAVSQAQAA 
181:	VKAALAEESS ARAALGGDVS LREQPEVQTA IGRLKDAWLN LRRTQVRAPA DGQVAKRSVQ 
241:	VGQQVAAGAP LMAVVPLSDV WVDANFKETQ LRHMKIGQPA ELVSDLYGKQ IVYRGRVAGF 
301:	SAGTGSAFSL IPAQNATGNW IKVVQRVPVR IVLNREDVDR HPLRIGLSMT VKVDTSAAGA 
361:	PVSKTPGAAL PEMESTDWSE VDRTVDEILG QSAP