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8.A.12.1.2
PedC accessory protein to PedD (the ABC pediocin exporter)

Accession Number:P37249
Protein Name:PedC aka PAPC
Length:174
Molecular Weight:19194.00
Species:Pediococcus acidilactici [1254]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Membrane1 / Single-pass type I membrane protein2
Substrate NONE

Cross database links:

RefSeq: NP_857604.1   
Entrez Gene ID: 1090331   

Gene Ontology

GO:0030152 P:bacteriocin biosynthetic process

References (2)

[1] “Cloning, expression, and nucleotide sequence of genes involved in production of pediocin PA-1, and bacteriocin from Pediococcus acidilactici PAC1.0.”  Marugg J.D.et.al.   1514784
[2] “Complete nucleotide sequence of pSMB 74, a plasmid encoding the production of pediocin AcH in Pediococcus acidilactici.”  Motlagh A.M.et.al.   7764941

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSKKFWSNIF LALGVFLAFA GVATISVSAD SSATIESNTS SKIIDGATYE ENIRGVIPIT 
61:	LTQYLHKAQT GEKFIVFVGF KECVHCRKFS PVMKQYLQQS QHPIYYLDYG NNGSFSMASQ 
121:	KQITDFYSTF ATPMSFMGTP TVALLDNGKV VSMTAGDDTT LSDLQQITAD YNNQ