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8.A.68.1.2
TMN7

Accession Number:Q9LIC2
Protein Name:Multispanning membrane protein-like
Length:641
Molecular Weight:74234.00
Species:Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:10
Substrate NONE

Cross database links:

Genevestigator: Q9LIC2 Q9LIC2
Entrez Gene ID: 820587   
Pfam: PF02990   
KEGG: ath:AT3G13772    ath:AT3G13772   

Gene Ontology

GO:0005794 C:Golgi apparatus
GO:0016021 C:integral to membrane
GO:0005634 C:nucleus
GO:0005774 C:vacuolar membrane
GO:0006878 P:cellular copper ion homeostasis
GO:0006882 P:cellular zinc ion homeostasis

References (4)

[1] “Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the regions of 4,251,695 bp covered by ninety P1, TAC and BAC clones.”  Nakamura Y.et.al.   10907853
[2] “Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.”  Salanoubat M.et.al.   11130713
[3] “Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.”  Salanoubat M.et.al.   11130713
[4] “Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones.”  Nakamura Y.et.al.   10907853

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKKTKGSSFR FYATLLLSFL SFSLSRAFYL PGVAPRDFQK GDPLYVKVNK LSSTKTQLPY 
61:	DYYYLNYCKP PKILNNAENL GEVLRGDRIE NSVYTFQMLE DQPCKVGCRV KLNADSTKNF 
121:	KEKIDDEYRA NMILDNLPVA VLRQRRDGSQ STTYEHGFRV GFKGSYEGSK EEKYFIHNHL 
181:	SFRVMYHRDQ ESDSARIVGF EVTPNSILHE YKEWDEKNPQ LTTCNKDTKN LIQGNTVPQE 
241:	VEQGKEIVFT YDVSFKESEI KWASRWDTYL LMNDDQIHWF SIINSLMIVL FLSGMVAMIM 
301:	MRTLYKDISN YNQLETQDEA QEETGWKLVH GDVFRPPVNS GLLCVYVGTG VQIFGMSLVT 
361:	MMFALLGFLS PSNRGGLMTA MVLLWVFMGI FAGYSSSRLH KMFKGNKWKR MTLKTAFMFP 
421:	GILFAIFFVL NALIWGEQSS GAIPFGTMFA LFCLWFGISV PLVFVGSYLG YKKPAIEDPV 
481:	KTNKIPRQVP EQPWYMKPVF SILIGGILPF GAVFIELFFI LTSIWLNQFY YIFGFLFIVF 
541:	LILIVTCAEI TVVLCYFQLC SEDYNWWWRA YLTAGSSAFY LFLYSIFYFF TKLEITKLVS 
601:	GMLYFGYMII ISYAFFVLTG TIGFYACFWF VRKIYSSVKI D