TCDB is operated by the Saier Lab Bioinformatics Group

8.A.82 The Calmodulin Calcium Binding Protein (Calmodulin) Family 

The calmodulin superfamily is a diverse group of calcium sensors and calcium signal modulators. Most members have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.  Some such proteins are found elsewhere in TCDB (e.g., under 1.I.1.1.1, Cell division protein 31 (P06704) and under TC# 3.A.5.9.1, Programmed cell death protein 6 (O75340) are calmodulin homologues with 161 and 191 aas, respectively, and the usual two EF hand domains.  EF hand domains are found in many protein such as the mitochondrial carrier family members with TC#s 2.A.29.1, 5 and 8, the Kv channel interacting protein 4,KChIP4, with TC# 5.B.1.1.7, the mitochondrial MICU1 protein of 467 aas and 1 TMS with TC# 8.A.44.1.1, and the mitochondrial LETM1 protein with TC# 2.A.97.1.3 (P91927).

Calmodulin regulates the family of voltage-gated CaV1-2 channels which comprises a prominent prototype for ion channel regulation with powerful Ca2+-sensing capabilities. It is mechanistically well defined and rich in biological implications (Ben-Johny and Yue 2014). Calmodulin also regulates TRPV5 which mediates Ca2+ influx into cells (Na and Peng 2014) as well as various other channels, including several voltage-gated calcium channels (VGCCs), transient receptor potential channels (TRPCs), NMDA receptors, calcium channels dependent on cyclic nucleotides and those located in the endoplasmic reticulum such as ryanodine receptors and all isoforms of IP3-dependent receptors (Rebas et al. 2012).

This family belongs to the: Calmodulin/Calcineurin/KChIP Superfamily.

References associated with 8.A.82 family:

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Ben-Johny, M. and D.T. Yue. (2014). Calmodulin regulation (calmodulation) of voltage-gated calcium channels. J Gen Physiol 143: 679-692. 24863929
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Na, T. and J.B. Peng. (2014). TRPV5: a Ca2+ channel for the fine-tuning of Ca2+ reabsorption. Handb Exp Pharmacol 222: 321-357. 24756712
Peraza, D.A., P. Cercós, P. Miaja, Y.G. Merinero, L. Lagartera, P.G. Socuéllamos, C. Izquierdo García, S.A. Sánchez, A. López-Hurtado, M. Martín-Martínez, L.A. Olivos-Oré, J.R. Naranjo, A.R. Artalejo, M. Gutiérrez-Rodríguez, and C. Valenzuela. (2019). Identification of IQM-266, a Novel DREAM Ligand That Modulates K4 Currents. Front Mol Neurosci 12: 11. 30787866
Rebas, E., T. Boczek, A. Kowalski, K. Kuśmirowska, M. Lisek, and L. Zylińska. (2012). [The role of calmodulin in calcium-dependent signalling in excitable cells]. Postepy Biochem 58: 393-402. 23662433
Tian, N.X., Y. Xu, J.Y. Yang, L. Li, X.H. Sun, Y. Wang, and Y. Zhang. (2018). KChIP3 N-Terminal 31-50 Fragment Mediates Its Association with TRPV1 and Alleviates Inflammatory Hyperalgesia in Rats. J. Neurosci. 38: 1756-1773. 29335353
Wang, H., Y. Yan, Q. Liu, Y. Huang, Y. Shen, L. Chen, Y. Chen, Q. Yang, Q. Hao, K. Wang, and J. Chai. (2007). Structural basis for modulation of Kv4 K+ channels by auxiliary KChIP subunits. Nat Neurosci 10: 32-39. 17187064
Yang, Y., N. Liu, Y. He, Y. Liu, L. Ge, L. Zou, S. Song, W. Xiong, and X. Liu. (2018). Improved calcium sensor GCaMP-X overcomes the calcium channel perturbations induced by the calmodulin in GCaMP. Nat Commun 9: 1504. 29666364
Zhang, C., X. Wei, G.S. Omenn, and Y. Zhang. (2018). Structure and Protein Interaction-based Gene Ontology Annotations Reveal Likely Functions of Uncharacterized Proteins on Human Chromosome 17. J Proteome Res. [Epub: Ahead of Print] 30265558