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8.A.9.3.1
SPRM1hc (Krautz-Peterson et al., 2007)

Accession Number:Q5DDT5
Protein Name:SPRM1hc
Length:622
Molecular Weight:70113.00
Species:Schistosoma japonicum (Blood fluke) [6182]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Plastid1 / Multi-pass membrane protein2
Substrate NONE

Cross database links:

Pfam: PF00128   

Gene Ontology

GO:0003824 F:catalytic activity
GO:0043169 F:cation binding
GO:0005975 P:carbohydrate metabolic process

References (1)

[1] “New perspectives on host-parasite interplay by comparative transcriptomic and proteomic analyses of Schistosoma japonicum.”  Liu F.et.al.   16617374

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MQLDSKEPFW YRLRWGLFIL FWVVWVGLLL AAILIIVFTP KCPPRPVLPF WRSTTGYWVN 
61:	PFAYKFIKRQ NWRSKRLDLY FPNDKIGDLK GLAKRLDYIK GTIGAGFIVL SSIFSGQYTN 
121:	DLKTLGLVDD YFNVDPALGT MEDFKNLVRS CHKNGIYLIL TMDFNSVSAK HPWTEFTYLL 
181:	EPYSSKKVSR LGGDARTVIQ GVSYYSVFGS HFVDLNLRET GALDRIADVA KFWLNEGIDG 
241:	ILLDNVAFYI ENGTESGAPI TKELGSQWFS KYPTSQIYIS ESVEVVRKIR KVVDEMSESS 
301:	GKPKLLAVDA GNTGYGVGKS EDISMQFLGT KDSPAAHVVV SRQFVKHRGW KAPPIDPEEI 
361:	KNNIFTYDML SVSDRNSMAL TTVSTSDSRQ SDLVALAATV LLPGTCLLYY GSELNEGTEN 
421:	VNFTGDFYPF DEKTIFTGSK ETDVLLSQLA MPWDQAGVGF SPALTNSTSF TEYLKRFGLR 
481:	ETVESATSSG RGATPFSLVQ DLIAIRRNES LLWGDFRLLK SSLITEELKF QIFERKAEGF 
541:	PAFIIVLRNE PNVASGTFDF SSVCSNIIPK IIYPVIRISQ LIRKLVASAF IFILVENLWF 
601:	MFSSVHEICQ VNKMLFISFS PH