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9.A.36.1.3
Scramblase homologue of 305 aas and 1 C-terminal TMS.

Accession Number:Q0RI11
Protein Name:Scramblase
Length:305
Molecular Weight:32700.00
Species:Frankia alni (strain ACN14a) [326424]
Location1 / Topology2 / Orientation3: Mitochondrion1
Substrate phospholipids

Cross database links:

eggNOG: NOG87223
HEGENOM: HBG695211
RefSeq: YP_714413.1   
Entrez Gene ID: 4236897   
Pfam: PF10708    PF03803   
BioCyc: FALN326424:FRAAL4219-MONOMER   
KEGG: fal:FRAAL4219   

References (1)

[1] “Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography.”  Normand P.et.al.   17151343

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MTQTIPPGWY ADPSGQHGSR WWDGSQWTEH TQPPPGQGGG YGQGGEYGPG GQIGQYGQDQ 
61:	AAAVPGQAWG APLGVQPGAV YTKHSAEQVQ RQVQEQAGVQ PAGPGGGTLF SEPVLVVNQK 
121:	SKIIEVTNEY AVFDQGGKQI GSVVEVGQSA LKKAARVLTS WDQFFSHRLE VRDAAGTVQL 
181:	LLHRPAKVFK SKVIVSLPDG SELGVIAQQN VFGKIRFDLQ AGGTTIGAIK AENWRAWNFS 
241:	IVDQNDVEVA RVTKTWEGLA RAMFTTADNY VVQLHRPLPQ PLHSMVVAAA LTIDTALKQD 
301:	SRGLG