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9.A.44.1.1
Halocin H4 precursor protein of 359 aas with one TMS. The mature HalH4 lacks the N-terminal 46 aas and has 313 aas.  Causes swelling and lysis of the target cell (Besse et al. 2015).

Accession Number:Q48236
Protein Name:Halocin-H4
Length:359
Molecular Weight:39639.00
Species:Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) [523841]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Secreted1
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSKDRDGRRT SRRGTLKKIG GFSLGALSFG AVGRTQAATG SSVTTADIAP PGPNGDPKSV 
61:	QIDDKYTGAE MYGEGDFRVG LGTDLTMYPP VYRESLGNGS GGWEFDFTVC GSTACRFVDS 
121:	NGDVKEDDKA KEMWWQEINF NDINQDLYSR NDSDWVGSTP ADTQPEFDYT EFALARDGVT 
181:	LALTALNPAM GSLALGATYF LSDMVNWIAS QHEDDSSLKR KWDYDGLSGP LYADSSTYLL 
241:	ARDEMTSNSY ESFTIDNIAV AFPEFPVRTK YYVTFTAPDD PSTQSISTLE EEGIYRVPAT 
301:	EVAAARPPGS RRSKSAADEM VYVADPKKFI EVEPVKNPSI PDRIYEEIEQ KKKQRSRKQ