TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


9.A.5.4.1
5 TMS homologue of YlbJ (242 aas).

Accession Number:D2YRH2
Protein Name:Putative uncharacterized protein
Length:242
Molecular Weight:25751.00
Species:Vibrio mimicus VM573 [671076]
Number of TMSs:4
Substrate Unknown

Cross database links:

Pfam: PF07670   

Gene Ontology

GO:0001882 F:nucleoside binding

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSQPTTLERK VTWGCYVALA FAVVFFSGLL QSNQWYGVFD FTTLNGAFGK VAYNVSETAD 
61:	GLQVATTSLR GQGGSGARDG FLFALTLIPT VMFALGMINV LEHYGALDAA RKLLTPLLRP 
121:	IMGIPGNTGL ALIASLQSTD AGAAMTRQLK DEGHMTKREA DVFTMFQFSA GATIVNFFSS 
181:	GAVLFTLTLA DGSSAVTSSI GLAVAVMFIF KIVGANLFRI YLNLTEGKES SNPEAQQEEA 
241:	AK