TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


9.B.18.1.1
The glycosyl transferase, GumD, of 484 aas and 5 or 6 TMSs, involved in xanthan gum polysaccharide synthesis and export (Bianco et al. 2014).  The N-terminus consists of a closely packed 4 TMS domain (residues 30 - 140), followed by a hydrophilic domain that includes 1 or 2 additional TMSs.  Residues 75 - 275 consist of the NADB_Rossmann or CoA binding_3 domain, while residues 300 to the end consist of the Bacterial Transferase (bac_transf) domain of CDD.

Accession Number:G0CIY2
Protein Name:Exopolysaccharide xanthan biosynthesis glycosyltransferase GumD
Length:484
Molecular Weight:54668.00
Species:Xanthomonas campestris pv. raphani 756C [990315]
Number of TMSs:5
Substrate Xanthan gum

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MLLADLSSAT YTTSSPRLLS KYSAAADLVL RVFDLTMVVA SGLIAYRIVF GTWVPAAPYR 
61:	VAIATTLLYS VICFALFPLY RSWRGRGLLS ELMVLGGAFG GVFALFAVHA LIVQVGEQVS 
121:	RGWVGLWFVG GLVSLVAART LLRGFLNHLR TQGVDVQRVV VVGLRHPVMK ISHYLSRNPW 
181:	VGMNMVGYFR TPYDLAVAEQ RQGLPCLGDP DELIEYLKNN QVEQVWISLP LGERDHIKQL 
241:	LQRLDRYPIN VKLVPDLFDF GLLNQSAEQI GSVPVINLRQ GGVDRDNYFV VAKALQDKIL 
301:	AVIALMGLWP LMLAIAVGVK MSSPGPVFFR QRRHGLGGRE FYMFKFRSMR VHDDHGTTIQ 
361:	QATKNDTRIT RFGSFLRRSS LDELPQIFNV LGGSMSIVGP RPHAAQHNTH YEKLINHYMQ 
421:	RHYVKPGITG WAQVNGFRGE TPELRTMKKR IQYDLDYIRR WSLWLDIRII VLTAVRVLGQ 
481:	KTAY