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9.B.20.3.1
COG3174 family member (548 aas; 14 TMSs in a 5+5+4 arrangement)

Accession Number:Q9HPQ3
Protein Name:Putative uncharacterized protein
Length:548
Molecular Weight:55827.00
Species:Halobacterium salinarium (strain ATCC 700922 / JCM 11081 / NRC-1) [64091]
Number of TMSs:13
Substrate Unknown

Cross database links:

HEGENOM: HBG732849
Entrez Gene ID: 1448114   
Pfam: PF02308   
KEGG: hal:VNG1525C   

Gene Ontology

GO:0016020 C:membrane

References (1)

[1] “Genome sequence of Halobacterium species NRC-1.”  Ng W.V.et.al.   11016950

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MFPRPTALPT AARMNPSLDA HVSRSAMLYH AVSGHGTKAT RLRRSLVPYN ELLFTASSGR 
61:	ERPGPKRHRQ ARTGRWAADV VGCVDPPRLT AGAPPGPWGD LDPVFMCTPA NVLVVTVTVD 
121:	ALVAAPLDSR IVRIAVAVAL GLFLGLEREW AQKAAGIRTF ALVSVLGAIF TMVDTERCAA 
181:	AGGACPPVLG GVGAVFVIVL TGVLMVSGLR SSEGTLHLTT AVSMLVAYGI GVLAALGAVL 
241:	PATVVAVTSS ILLVFKRELH GFAWGLSREE LRSTTEFAIL AFVVYPVLPT GAMTVGRGGW 
301:	VVEIEPRVVW SMVVFVAAIG IVNYVVVQAY GGCGIAVTGF FGGLASSTAV VGTLLDHVDA 
361:	HADATRYAVA GVLLANAAMA LRNLLIVVVF TASAGVLVTG TLPLAVIVTG SIAIAAVTAD 
421:	WSQSVSMDLD TPFSMRNALG FGAMFLVVVV AGGLAETQFG SAGLLVTAVV SGLVSSAGAT 
481:	TSAVVLYRTN AVDADTAAIA VLLATASSIG VKAGLSATSA NRTFAARVVA YSAGLLVVGG 
541:	GAAVVLAA