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9.B.62.1.2
The CopD copper resistance protein of 310 aas and 8 TMSs.

Accession Number:P12377
Protein Name:CopD, Copper resistance protein D
Length:310
Molecular Weight:33089.00
Species:Pseudomonas syringae (pv. tomato) [323]
Number of TMSs:8
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate Cu2+

Cross database links:

Pfam: PF05425   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane

References (2)

[1] “Nucleotide sequence and organization of copper resistance genes from Pseudomonas syringae pv. tomato.”  Mellano M.A.et.al.   3372485
[2] “A two-component regulatory system required for copper-inducible expression of the copper resistance operon of Pseudomonas syringae.”  Mills S.D.et.al.   8449873

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MEDPLSIAVR FALYTDLMML FGLALFGLYS LRGAERRSGA VLPFRPLLSA TALIGLLLSV 
61:	VSIVLMAKAM SGASEWLEAV PHAEMMVTQT ELGTAWLIRM AALVGAAVTI AFNLRVPMAS 
121:	LLMVSLLGGV ALATLAWTGH GAMDEGSRRF WHFSADILHL WSSGGWFGAL VAFALMLRPN 
181:	KVETLQSVQV LSRTLSGFER AGAVIVAFIV LSGVVNYLFI VGPQVSGVVE STYGVLLLGK 
241:	LALFGLMVGL ASANRFVLSP AFERAVHRGE YARAARSIRY SMALELGAAV LVLGLIAWLG 
301:	TLSPEMEAGM