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9.B.82.1.3
Arabidopsis thaliana endoplasmic reticulum retrieval protein 1A (ATREA1A or Rer1A)

Accession Number:O48670
Protein Name:RER1A
Length:191
Molecular Weight:21977.00
Species:Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:4
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Heavy metal cations

Cross database links:

Genevestigator: O48670
eggNOG: KOG1688
HEGENOM: HBG315333
RefSeq: NP_195633.1   
Entrez Gene ID: 830077   
Pfam: PF03248   
KEGG: ath:AT4G39220   

Gene Ontology

GO:0005794 C:Golgi apparatus
GO:0016021 C:integral to membrane
GO:0006890 P:retrograde vesicle-mediated transport, Golg...

References (3)

[1] “The Arabidopsis thaliana RER1 gene family: its potential role in the endoplasmic reticulum localization of membrane proteins.”  Sato K.et.al.   10737146
[2] “Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.”  Mayer K.F.X.et.al.   10617198
[3] “Empirical analysis of transcriptional activity in the Arabidopsis genome.”  Yamada K.et.al.   14593172

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence 
1:	MDESGGDSGS VATPVQQRAH EAWRIYQHYL DKTTPHANYR WIGTLVVALI YCLRVYYIQG 
61:	FYIIAYGLGI YLLNLLIGFL SPLVDPEAGG VSDGPSLPTR GSDEFKPFIR RLPEFKFWYS 
121:	MTKAFCIAFL MTFFSVFDVP VFWPILLCYW IVLFVLTMRR QIAHMIKYKY IPFSFGKQKY 
181:	GGRSSSGSRA D