1.A.86 The Human Papilloma Virus type 16 (HPV16) L2 Viroporin (L2 Viroporin) Family

During cellular invasion, human papilloma virus type 16 (HPV16) transfers its viral genome (vDNA) across the endosomal membrane prior to its accumulation at nuclear PML bodies for the establishment of infection. After cellular uptake, the capsid likely undergoes pH-dependent disassembly within the endo-/lysosomal compartment, thereby exposing hidden domains in L2 that facilitate membrane penetration of L2/vDNA complexes. Regions of L2 that physically interact with membranes include residues 45 to 67. In vitro, the predicted TMS adopts an alpha-helical structure in lipid environments and can function as a real TM domain, although not as efficiently as the bona fide TM domain (Bronnimann et al. 2013). An L2 double point mutant renders the TM domain nonfunctional and blocks HPV16 infection by preventing endosomal translocation of vDNA. The TM domain contains three highly conserved GxxxG motifs. These motifs facilitate homotypic and heterotypic interactions between TM helices and are important for vDNA translocation. Disruption of some of these GxxxG motifs resulted in noninfectious viruses. This TMS self-associates for the transfer of vDNA across the endo-/lysosomal membrane (Bronnimann et al., 2013). There is some question as to whether L2 functions as a viroporin.



This family belongs to the .

 

References:

Bronnimann, M.P., J.A. Chapman, C.K. Park, and S.K. Campos. (2013). A transmembrane domain and GxxxG motifs within L2 are essential for papillomavirus infection. J. Virol. 87: 464-473.

Campos, S.K. (2017). Subcellular Trafficking of the Papillomavirus Genome during Initial Infection: The Remarkable Abilities of Minor Capsid Protein L2. Viruses 9:.

Demaegd, D., F. Foulquier, A.S. Colinet, L. Gremillon, D. Legrand, P. Mariot, E. Peiter, E. Van Schaftingen, G. Matthijs, and P. Morsomme. (2013). Newly characterized Golgi-localized family of proteins is involved in calcium and pH homeostasis in yeast and human cells. Proc. Natl. Acad. Sci. USA 110: 6859-6864.

Examples:

TC#NameOrganismal TypeExample
1.A.86.1.1

The human papilloma virus type 16 (HPV16) L2  capsid protein of 99aas. It mediates virion endosomal escape and transport of the viral capsid to the nucleus (Bronnimann et al., 2013).

Viruses

L2 of HPV16 (P03107)

 
1.A.86.1.2

L2 protein of 187 aas of human papilloma virus (Campos 2017).

L2 protein of human papilloma virus

 
1.A.86.1.3

The L2 protein of 533 aas and 1 TMS.

The L2 protein of Fulmarus glacialis papillomavirus 1

 
1.A.86.1.4

Late protein L2 of 155 aas.

L2 of Chlamydia trachomatis