1.B.30 The Plastid Outer Envelope Porin of 16 kDa (OEP16) Family

OEP16 is a pea chloroplast cation-selective, highly conductive outer membrane porin with a strong bias for amino acids and primary amines (Pohlmeyer et al., 1997; Samol et al., 2011). It is voltage-sensitive with highest open probability at 0 mV, decreasing exponentially with higher potentials (Bölter and Soll, 2001). It apparently functions as the translocation (import) pore for NADPH:protochlorophyllide oxidoreductase A (PORA) (Samol et al. 2011).  Triosephosphates and uncharged sugars are not transported. It appears to be a homooligomer in the membrane. Dimers, trimers and hexamers have been suggested by different groups. It consists of 146 aas and has homologues of about the same size in other plants.  A. thaliana has at least three OEP16 paralogues. An N-terminal 60 residue segment exhibits about 35% identity with a C-terminal region of a 251 residue protein from Methanococcus jannaschii (MJ1614; pirE64501). This region (residues 21-93 in OEP16 have been suggested to include two β-strands and one α-helix) that appears to form a channel in liposomes (Steinkamp et al., 2000).

OEP16 shows a large segment that is similar to mitochondrial translocase subunits, Tim 17, Tim 22 and Tim 23 (TC# 3.A.8) as well as the peroxysomal membrane protein 4 (PxMP4; TC# 1.B.69) and a subunit of eukaryotic NADH dehydrogenase complex (TC# 3.D.1).  These proteins comprise the Tim17 superfamily (see the TC superfamily link.)  OEP16 is predicted to contain both α- and β-structure. The N-terminal domain consists of up to four β-strands while the C-terminal region forms 4 transmembrane α-helices that presumably form the homooligomeric pores. OEP16-1 of A. thaliana is involved in PORA precursor import and by virtue of this activity, confers photoprotection onto etiolated seedlings during greening (Samol et al., 2011). The 3-d  NMR structure of OEP16 has been determined (Zook et al. 2013).  It consists of an N-termina β-sheet and four C-terminal transmembrane α-helices with TMSs 1 and 2 forming a structure similar to TMSs 3 and 4 (Zook et al. 2013).

The generalized transport reaction catalyzed by OEP16 is:

Cationic solutes and amino acids (cytoplasm)  cationic solutes and amino acids (chloroplast)



This family belongs to the Outer Membrane Pore-forming Protein (OMPP) Superfamily IV (Tim17/OEP16/PxMPL (TOP) Superfamily).

 

References:

Bölter, B. and J. Soll. (2001). Ion channels in the outer membranes of chloroplasts and mitochondria: open doors or regulated gates? EMBO J. 20: 1-6.

Linke, D., J. Frank, J.F. Holzwarth, J. Soll, C. Boettcher, and P. Fromme. (2000). In vitro reconstitution and biophysical characterization of OEP16, an outer envelope pore protein of pea chloroplasts. Biochemistry 39: 11050-11056.

Ni, d.a.Q., J. Zook, D.A. Klewer, R.A. Nieman, J. Soll, and P. Fromme. (2011). Isolation, folding and structural investigations of the amino acid transporter OEP16. Protein Expr Purif 80: 157-168.

Pohlmeyer, K., J. Soll, T. Steinkamp, S. Hinnah and R. Wagner. (1997). Isolation and charaterization of an amino acid-selective channel protein present in the chloroplastic outer envelope membrane. Proc. Natl. Acad. Sci. USA 94: 9504-9509.

Pudelski, B., A. Schock, S. Hoth, R. Radchuk, H. Weber, J. Hofmann, U. Sonnewald, J. Soll, and K. Philippar. (2012). The plastid outer envelope protein OEP16 affects metabolic fluxes during ABA-controlled seed development and germination. J Exp Bot 63: 1919-1936.

Samol, I., C. Rossig, F. Buhr, A. Springer, S. Pollmann, A. Lahroussi, D. von Wettstein, C. Reinbothe, and S. Reinbothe. (2011). The outer chloroplast envelope protein OEP16-1 for plastid import of NADPH:protochlorophyllide oxidoreductase A in Arabidopsis thaliana. Plant Cell Physiol. 52: 96-111.

Steinkamp, T., K. Hill, S.C. Hinnah, R. Wagner, T. Röhl, K. Pohlmeyer, and J. Soll. (2000). Identification of the pore-forming region of the outer chloroplast envelope protein OEP16. J. Biol. Chem. 275: 11758-11764.

Zook, J.D., T.R. Molugu, N.E. Jacobsen, G. Lin, J. Soll, B.R. Cherry, M.F. Brown, and P. Fromme. (2013). High-resolution NMR reveals secondary structure and folding of amino acid transporter from outer chloroplast membrane. PLoS One 8: e78116.

Examples:

TC#NameOrganismal TypeExample
1.B.30.1.1

Outer envelope porin, OEP16.  Has an N-terminal 4 β-strand structure that forms the pore, and a C-terminla domain consisting of 3 α-helices (Steinkamp et al. 2000).  Cation-selective channel activity for amino acids and amines has been demonstrated following reconstitution (Linke et al. 2000; Ni et al. 2011).  It mediates metabolic fluxes during seed development and germination (Pudelski et al. 2012).

plants

OEP16 of Pisum sativum

 
1.B.30.1.2Outer envelope pore protein 16-2, chloroplastic (Chloroplastic outer envelope pore protein of 16 kDa 2) (AtOEP16-2) (OEP16-2) (Outer plastid envelope protein 16-S) (AtOEP16-S) (Seeds outer plastid envelope protein 16)PlantsOP162 of Arabidopsis thaliana
 
Examples:

TC#NameOrganismal TypeExample
1.B.30.2.1

OEP16-4; Tim17/Tim22/Tim23/Pmp24 family member of 136 aas

Plants

OEP16-4 of Arabidopsis thaliana

 
Examples:

TC#NameOrganismal TypeExample
1.B.30.3.1

Hypothetical protein of 190 aas

Stramenophiles (marine diatom)

HP of Thalassiosira pseudonana

 
Examples:

TC#NameOrganismal TypeExample
1.B.30.4.1

Outer envelope pore protein 16-3 (OEP16-3) of 159 aas.  Probable protein translocase.

Plants

OEP16-3 of Solanum lycopersicum

 
Examples:

TC#NameOrganismal TypeExample
1.B.30.5.1

Uncharacterized protein translocase subunit of 161 aas and 4 TMSs.

Red Algae

UP of Galdieria sulphuraria