9.A.44 The Archaeocin/Halocin H4 (HalH4) Family 

Archaeocins are ribosomally-synthesized antimicrobial peptides or proteins produced by Archaea. Halocins and sulfolobicins are produced by Archaea belonging to the order Halobacteriales (Euryarchaeota) and Sulfolobales (Crenarchaeota), respectively (Besse et al. 2015). One of the best characterized halocins is HalH4 from Haloferax mediterranei, the gene being found on the pHM300 megaplasmid. HalH4 is a 40 kDa protein with an N-terminal 46 aa leader peptide which is cleaved off leaving a 313 aa mature halocin. HalH4 uses the membrane as primary target and modifies its permeabillity, disrupting the ion gradients across the membrane. It may affect the passive H+ permeability specifically (Besse et al. 2015). Upon addition, sweiling followed by cell lysis occurs. It seems likely that it is a pore-former.



This family belongs to the .

 

References:

Besse A., Peduzzi J., Rebuffat S. and Carre-Mlouka A. (2015). Antimicrobial peptides and proteins in the face of extremes: Lessons from archaeocins. Biochimie. 118:344-55.

Examples:

TC#NameOrganismal TypeExample
9.A.44.1.1

Halocin H4 precursor protein of 359 aas with one TMS. The mature HalH4 lacks the N-terminal 46 aas and has 313 aas.  Causes swelling and lysis of the target cell (Besse et al. 2015).

HalH4 of Haloferax mediterranei (Halobacterium mediterranei)

 
9.A.44.1.2

HalH4 homologue of 278 aas and 1 TMS.

HalH4 homologue of Natrialba aegyptia

 
9.A.44.1.3

Uncharacterized protein of 312 aas and 1 TMS.

UP of Natrialba magadii (Natronobacterium magadii)

 
Examples:

TC#NameOrganismal TypeExample
9.A.44.2.1

Uncharacterized protein of 316 aa

UP of Methanococcoides burtonii

 
9.A.44.2.2

Uncharacterized protein of 106 aas

UP of Methanosarcina acetivorans