9.B.353.  The Uncharacterized Bacterial/Archaeal 11 TMS Protein (UBAP) Family 

The majority of the members of this family have about 400 - 700 aas, an N-terminal TMS followed by a hydrophilic region of variable length, followed by about 10 variably spaced TMSs, often in a 2 + 2 + 2 + 2, etc. arrangement.  The functions of these proteins are not known. They may be distantly related to the DMT superfamily (TC# 2.A.7.3).



This family belongs to the .

Examples:

TC#NameOrganismal TypeExample
9.B.353.1.1

Uncharacterized protein of 565 aas and about 11 - 13 TMSs.

UP of Emticicia sp. C21

 
9.B.353.1.10

Uncharacterized protein of 579 aas and 11 TMSs in a 1 + 10 TMS arrangement.

UP of Actinophytocola xinjiangensis

 
9.B.353.1.11

Uncharacterized protein of 581 aas and 11 TMSs in a 1 + 10 TMS arrangement.

UP of Acidimicrobiaceae bacterium (freshwater metagenome)

 
9.B.353.1.12

Uncharacterized protein of 594 aas and 11 TMSs in a 1 + 10 TMS arrangement. This protein shows 22.4% identity with 2.A.125.2.1 (E-RFT family) (e-8).

UP of Planktothrix tepida

 
9.B.353.1.13

Uncharacterized protein of 553 aas and 12 TMSs in a 1 + 10 + 1 TMS arrangement.

UP of Chlorobium sp. (freshwater metagenome)

 
9.B.353.1.14

Uncharacterized protein of 549 aas and 11 TMSs in a 1 + 10 TMS arrangement.

UP of Candidatus Komeilibacteria

 
9.B.353.1.15

Uncharacterized protein of 567 aas and 11 TMSs in a 1 + 10 TMS arrangement.

UP of Ralstonia solanacearum

 
9.B.353.1.2

Uncharacterized protein of 581 aas and 12 TMSs in a 1 + 4 + 2 + 2 + 2 + 1 TMS arrangement.

UP of Verrucomicrobia bacterium

 
9.B.353.1.3

Uncharacterized protein of 435 aas and 11 TMSs in a 1 + 10 TMS arrangement.

UP of Dyadobacter fermentans

 
9.B.353.1.4

Uncharacterized protein of 361 aas and 11 TMSs in a 1 + 10 TMS arrangement

UP of Methanosarcina barkeri

 
9.B.353.1.5

Uncharacterized protein of 586 aas and 12 or 13 TMSs in a 1 + 11 or 12 TMS arrangement.

UP of Gloeocapsopsis sp. AAB1

 
9.B.353.1.6

Uncharacterized protein of 555 aas and 11 TMSs in a 1 + 10 TMS arrangement

UP of Pseudomonas citronellolis

 
9.B.353.1.7

Uncharacterized protein of 594 aas and 13 or 14 TMSs in a 1 + 2 + 2 + 2 + 1 + 4 TMS arrangement.

UP of Paenibacillus typhae

 
9.B.353.1.8

Uncharacterized protein of 564 aas and 11 TMSs in a 1  10 TMS arrangement.  The last 10 TMSs of this protein may be realted to the DMT superfamily (1.A.7).

UP of Dyadobacter fermentans

 
9.B.353.1.9

Uncharacterized protein of 601 aas and 10 or 11 TMSs in a 1 + 5 + 5 TMS arrangement.

UP of Larkinella rosea

 
Examples:

TC#NameOrganismal TypeExample
9.B.353.2.1

Uncharacterized protein of 413 aas and 11 TMSs in a 1 + 4 + 6 TMS arrangement.

UP of Proteobacteria bacterium

 
9.B.353.2.2

Uncharacterized protein of 423 aas and 11 - 13 TMSs.

UP of Proteobacteria bacterium (phyllosphere metagenome)