WAIT: Web-based Average Identity and Topology program

Biotools>WAIT input
Parameters:	Window size: Identity window size: Angle:
Input Sequence 1:	Please enter the first sequence with FASTA(?) format you want to analyze:
Input Sequence 2:	Please enter the second sequence with FASTA(?) format you want to analyze:
Amino Acid groups to display:	Amphipathicity curve
Output Format:	PNG JPG PDF EPS TIFF SVG
Image Resolution:	dpi
Plot features:	Grid Legend X-ticks distance: Axis label font size: Axis tick font size: Hydropathy smoothing kernel: Identity smoothing kernel:
Figure properties:	Figure width: Figure height: Title:

About	Plots the hydropathy, average identity, and topology of a pair of aligned protein sequences. TMSs are predicted with HMMTOP.
Get help	This program was developed in the group of Dr. Milton Saier. Questions can be sent to: Kevin Hendargo <khendarg at-sign ucsd dot edu> or Arturo Medrano <l1medranosoto at-sigh ucsd dot edu>.

Web-based Average Identity and Topology (WAIT)