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1.C.1.4.1
Colicin E2 or E9 (Mosbahi et al., 2002). Colicin E2 is still in contact with its receptor and import machinery when its nuclease domain enters the cytoplasm (Duche, 2007). Colicin E3 is almost identical to Colicin E3 (RNAase).  The crystal structure  of Colicin E3 with bound BtuB and with the N-terminal translocation (T) domain of E3 and E9 (DNAase) inserted into the OM OmpF porin has been solved (Cramer et al. 2018) revealing: (I) Details of the initial interaction of the colicin central receptor (R)- and N-terminal T-domain with OM receptors/translocators. (II) Features of the translocon include: (a) high-affinity (K d ≈ 10-9 M) binding of the E3 receptor-binding R-domain E3 to BtuB; (b) insertion of disordered colicin N-terminal domain into the OmpF trimer; (c) binding of the N-terminus, documented for colicin E9, to the TolB protein on the periplasmic side of OmpF. Reinsertion of the colicin N-terminus into the second of the three pores in OmpF implies a colicin anchor site on the periplasmic side of OmpF. (III) Studies on the insertion of nuclease colicins into the cytoplasmic compartment imply that translocation proceeds via the C-terminal catalytic domain, proposed here to insert through the unoccupied third pore of the OmpF trimer, consistent with in vitro occlusion of OmpF channels by the isolated E3 C-terminal domain (Cramer et al. 2018).

Accession Number:P04419
Protein Name:Colicin-E2
Length:581
Molecular Weight:61629.00
Species:Escherichia coli GN=col PE=1 SV=2 [562]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate ion

Cross database links:

Pfam: PF03515   

Gene Ontology

GO:0005727 C:extrachromosomal circular DNA
GO:0004519 F:endonuclease activity
GO:0046872 F:metal ion binding
GO:0003676 F:nucleic acid binding
GO:0005102 F:receptor binding
GO:0019835 P:cytolysis
GO:0042742 P:defense response to bacterium
GO:0009405 P:pathogenesis

References (3)

[1] “Molecular characterisation of the colicin E2 operon and identification of its products.”  Cole S.T.et.al.   3892228
[2] “Comparative nucleotide sequences encoding the immunity proteins and the carboxyl-terminal peptides of colicins E2 and E3.”  Lau P.C.K.et.al.   6095211
[3] “Structure and expression of the ColE2-P9 immunity gene.”  Masaki H.et.al.   2987833
Structure:
2YSU   3U43     

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSGGDGRGHN TGAHSTSGNI NGGPTGLGVG GGASDGSGWS SENNPWGGGS GSGIHWGGGS 
61:	GHGNGGGNGN SGGGSGTGGN LSAVAAPVAF GFPALSTPGA GGLAVSISAG ALSAAIADIM 
121:	AALKGPFKFG LWGVALYGVL PSQIAKDDPN MMSKIVTSLP ADDITESPVS SLPLDKATVN 
181:	VNVRVVDDVK DERQNISVVS GVPMSVPVVD AKPTERPGVF TASIPGAPVL NISVNNSTPE 
241:	VQTLSPGVTN NTDKDVRPAG FTQGGNTRDA VIRFPKDSGH NAVYVSVSDV LSPDQVKQRQ 
301:	DEENRRQQEW DATHPVEAAE RNYERARAEL NQANEDVARN QERQAKAVQV YNSRKSELDA 
361:	ANKTLADAIA EIKQFNRFAH DPMAGGHRMW QMAGLKAQRA QTDVNNKQAA FDAAAKEKSD 
421:	ADAALSAAQE RRKQKENKEK DAKDKLDKES KRNKPGKATG KGKPVGDKWL DDAGKDSGAP 
481:	IPDRIADKLR DKEFKNFDDF RKKFWEEVSK DPDLSKQFKG SNKTNIQKGK APFARKKDQV 
541:	GGRERFELHH DKPISQDGGV YDMNNIRVTT PKRHIDIHRG K