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3.A.5.7.1
General secretory (Sec) pathway including SecYEGDF/Srp54/Srp19/FtsY (Albers et al. 2006).

Accession Number:P28542
Protein Name:SecY
Length:487
Molecular Weight:52533.00
Species:Haloarcula marismortui (Halobacterium marismortui) [2238]
Number of TMSs:9
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate protein polypeptide chain

Cross database links:

RefSeq: YP_136213.1   
Entrez Gene ID: 3128502   
Pfam: PF10559    PF00344   
BioCyc: HMAR272569:RRNAC1589-MONOMER   
KEGG: hma:rrnAC1589   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0015450 F:P-P-bond-hydrolysis-driven protein transmem...
GO:0015031 P:protein transport
GO:0055085 P:transmembrane transport

References (2)

[1] “The genes for ribosomal protein L15 and the protein equivalent to secY in the archaebacterium Haloarcula (Halobacterium) marismortui.”  Arndt E.et.al.   1543743
[2] “Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea.”  Baliga N.S.et.al.   15520287

External Searches:

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MSWKDTAEPL LVRMPAVQRP EGHVPFKRKL TWTGGVLLLY FFLTNVKLFG LDIDASQQVF 
61:	GRFSSILASG QGSIMQLGIG PIVTASIVLQ LLGGADLLGL NTQDDPRDQI LYQGLQKLLV 
121:	LVMICLTGLP MVFAGGFLPA DTAVANSLGI GTAGVQWLIF AQMFVGGVLI LFMDEVISKW 
181:	GVGSGIGLFI VAGVSQRLVG GLLTAPFLGN SEGIIYTWYL FITGERGTGP VLAADGLQTV 
241:	LLQGELLGLF TTVLIFAVVV YAESVRVEIP LSNARVKGAR GRFPVKLIYA SVLPMILVRA 
301:	LQANIQFLGR ILNAQLGSMP AFLGTYANGQ PTGGLFYFLA PIQSRGDWMW WLEGTAQPVW 
361:	QILTRVGIDL FVMLVGGAVF AVFWVETTDM GPEATAKQIH NSGMQIPGFR QNVGVIEKVL 
421:	ERYIPQVTVI GGALVGLLAV MANMLGTIGG VSGTGLLLTV SITYKLYEEI AEEQLMEMHP 
481:	MMRQMFG