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Accession Number: | P42260 |
Protein Name: | Glutamate receptor, ionotropic kainate 2 |
Length: | 908 |
Molecular Weight: | 102470.00 |
Species: | Rattus norvegicus (Rat) [10116] |
Number of TMSs: | 4 |
Location1 / Topology2 / Orientation3: | Cell membrane1 / Multi-pass membrane protein2 |
Substrate | ion |
Cross database links:
DIP: | DIP-29256N |
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Entrez Gene ID: | 54257 |
Pfam: | PF01094 PF00060 PF10613 |
KEGG: | rno:54257 |
Gene Ontology
GO:0030054
C:cell junction
GO:0032839
C:dendrite cytoplasm
GO:0043204
C:perikaryon
GO:0045211
C:postsynaptic membrane
GO:0043195
C:terminal button
GO:0005234
F:extracellular-glutamate-gated ion channel activity
GO:0015277
F:kainate selective glutamate receptor activity
GO:0030165
F:PDZ domain binding
GO:0042803
F:protein homodimerization activity
GO:0031624
F:ubiquitin conjugating enzyme binding
GO:0031625
F:ubiquitin protein ligase binding
GO:0051967
P:negative regulation of synaptic transmission, glutamatergic
GO:0051402
P:neuron apoptosis
GO:0043113
P:receptor clustering
GO:0046328
P:regulation of JNK cascade
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References (10)[1] “Cloning of a cDNA for a glutamate receptor subunit activated by kainate but not AMPA.” Egebjerg J.et.al. 1648177 [2] “High-affinity kainate and domoate receptors in rat brain.” Lomeli H.et.al. 1322826 [3] “Determinants of Ca2+ permeability in both TM1 and TM2 of high affinity kainate receptor channels: diversity by RNA editing.” Koehler M.et.al. 7681676 [4] “The PDZ1 domain of SAP90. Characterization of structure and binding.” Piserchio A.et.al. 11744724 [5] “Actinfilin is a Cul3 substrate adaptor, linking GluR6 kainate receptor subunits to the ubiquitin-proteasome pathway.” Salinas G.D.et.al. 17062563 [6] “SUMOylation regulates kainate-receptor-mediated synaptic transmission.” Martin S.et.al. 17486098 | |
Structure: | |
[...more] |
External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MKIISPVLSN LVFSRSIKVL LCLLWIGYSQ GTTHVLRFGG IFEYVESGPM GAEELAFRFA 61: VNTINRNRTL LPNTTLTYDT QKINLYDSFE ASKKACDQLS LGVAAIFGPS HSSSANAVQS 121: ICNALGVPHI QTRWKHQVSD NKDSFYVSLY PDFSSLSRAI LDLVQFFKWK TVTVVYDDST 181: GLIRLQELIK APSRYNLRLK IRQLPADTKD AKPLLKEMKR GKEFHVIFDC SHEMAAGILK 241: QALAMGMMTE YYHYIFTTLD LFALDVEPYR YSGVNMTGFR ILNTENTQVS SIIEKWSMER 301: LQAPPKPDSG LLDGFMTTDA ALMYDAVHVV SVAVQQFPQM TVSSLQCNRH KPWRFGTRFM 361: SLIKEAHWEG LTGRITFNKT NGLRTDFDLD VISLKEEGLE KIGTWDPASG LNMTESQKGK 421: PANITDSLSN RSLIVTTILE EPYVLFKKSD KPLYGNDRFE GYCIDLLREL STILGFTYEI 481: RLVEDGKYGA QDDVNGQWNG MVRELIDHKA DLAVAPLAIT YVREKVIDFS KPFMTLGISI 541: LYRKPNGTNP GVFSFLNPLS PDIWMYILLA YLGVSCVLFV IARFSPYEWY NPHPCNPDSD 601: VVENNFTLLN SFWFGVGALM QQGSELMPKA LSTRIVGGIW WFFTLIIISS YTANLAAFLT 661: VERMESPIDS ADDLAKQTKI EYGAVEDGAT MTFFKKSKIS TYDKMWAFMS SRRQSVLVKS 721: NEEGIQRVLT SDYAFLMEST TIEFVTQRNC NLTQIGGLID SKGYGVGTPM GSPYRDKITI 781: AILQLQEEGK LHMMKEKWWR GNGCPEEESK EASALGVQNI GGIFIVLAAG LVLSVFVAVG 841: EFLYKSKKNA QLEKRSFCSA MVEELRMSLK CQRRLKHKPQ APVIVKTEEV INMHTFNDRR 901: LPGKETMA