TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.112.2.1
Uncharacterized protein of 384 aas and 4 TMSs.  The region of sequence similarity with established CorC proteins is in a hydrophilic region following the TMSs, putting into question the assignment of this protein to family 9.A.40. The N-terminal domain of 100 aas and 2 TMSs does not show sequence similarity with anything outside of the Candidatus Saccharibacteria bacteria.

Accession Number:PLS82034
Protein Name:PLS82034.1 hypothetical protein CYG49_00155 [Candidatus Saccharibacteria bacterium]
Length:385
Molecular Weight:
Species:Candidatus Saccharibacteria bacterium [2026720]
Number of TMSs:3
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MNTLKIIHRV LFIIGLLEIS PIHNIAYGQR CTGDYCYNAS IFRTIRSSMP TKTLFIISLL 
61:	SWLLLTMVRA FRVPSTPISA FELERRVKQH DKEAIALQER ERHLPQVRAL RFLLEAVLTV 
121:	LFITLLVTAY GFWVGAFWSM VGLLLLPIFG RTHMVRGGAE EWYSKNEVKI LELAAQLKGP 
181:	LRFFQQDSEL PPVTLHSKEE LLFLTQQAKG VLSPNERDLL QHSLQFSELR VEDIMTPRSV 
241:	VETVEANETV GALLLDRLHR TGHSRFPIIE GDIDHVVGML YLHDVISLDK TVQLAREAMQ 
301:	SKVFYIRHDA TLDHALHAFL RTHHHLFVVV NENRETVGII SLEDVIEALL GRKIDDEFDA 
361:	FSDLRKVAAR NPHKINLPPQ RQDV