TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.119.1.6
Uncharacterized protein of 131 aas and 2 TMSs. This protein corresponds to the last two TMSs of the protein with TC# 1.A.119.1.2.  It could be a short version of the latter protein, or it could be an incomplete sequence. However, there seem to be multiple versions of this short protein (see TC#s 1.A.119.1.4, 1.5, and 1.6) suggesting that it may be a full-length protein. Also, the two N-terminal TMSs are followed in this protein by a hydrophilic region not present in the other homologues.

Accession Number:VDL87707.1
Protein Name:VDL87707.1 unnamed protein product [Nippostrongylus brasiliensis]
Length:132
Molecular Weight:
Species:Nippostrongylus brasiliensis [27835]
Number of TMSs:1
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MILQTLKLIS SEGFATWMFQ GLTFLLPFLV VAYVLELYNA YTLYSLWTTQ ECVWQGNIHG 
61:	VAVTERVQPA QAAALILVLK LLNQRNVCCE QEELRVECLN KEDYNGKECK TPRLNVNLNS 
121:	SSQIAPVFCT I