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1.A.121.1.9
Uncharacterized protein of 348 aas with 3 N-terminal TMSs, followed by a hydrophilc region of ~100 aas, followed by 4 TMSs.

Accession Number:KAF2073363.1
Protein Name:KAF2073363.1 hypothetical protein CYY_005333 [Polysphondylium violaceum]
Length:349
Molecular Weight:
Species:Polysphondylium violaceum [133409]
Number of TMSs:7
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MTQLLFFGCF FVAFAPIITF FFMVISKNSQ LIILSIGGSF FWLVSALIAS VWWFIIVPMR 
61:	ESFWFTIPFS IAFQEVFRYI FYRLYAWGFN ERPSLAQIET LARQAAQEKR SRTTSAGDES 
121:	MSDISAASSG VTNRSSSNKQ QKESMNQQDL QSSFDQKQDS FASSSISSIN NNDKNNNNNN 
181:	SGNQEQQAVG QSSGKEEYPK DTEINTRLET LSARPNHTLS AAAIGTGSGI TYAFIMYASI 
241:	LWESTGPGAL FSESCPTVNL FMISALTTLF ITILHVAFNI LAFQGYRSKK YHLVLYVLLA 
301:	HFAVSYLTLL NQKKSCIGSL VPITGITIFT VIFSIYSLLR SDSITKIN