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1.A.122.1.2
Polyprotein of 2134 aas from which protein 3A is derived.

Accession Number:Q9YLS4
Protein Name:Genome polyprotein
Length:2134
Molecular Weight:238980.00
Species:Avian encephalomyelitis virus (strain Calnek vaccine) (AEV) [475778]
Location1 / Topology2 / Orientation3: Host cytoplasmic vesicle membrane1 / Peripheral membrane protein2 / Cytoplasmic side3
Substrate

Cross database links:

External Searches:

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  • 2° Structure (Network Protein Sequence Analysis)

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSKLFSTVGK TVDEVLSVLN DENTESYAGP DRTAVVGGGF LTTVDQSSVS TATMGSLQDV 
61:	QYRTAVDIPG SRVTQGERFF LIDQREWNST QSEWQLLGKI DIVKELLDQS YAVDGLLKYH 
121:	SYARFGLDVI VQINPTSFQA GGLIAALVPY DQVDIESIAA MTTYCHGKLN CNINNVVRMK 
181:	VPYIYSRGCY NLRNSAYSIW MLVIRVWSQL QLGSGTSTQI TVTTLARFVD LELHGLSPLV 
241:	AQMMRNEFRL SSSSNIVNLA NYEDARAKVS LALGQEEFSR DSSSTGGELL HHFSQWTSIP 
301:	CLAFTFTFPG TVGPGTQIWS TTVDPFSCNL RASSTVHPTN LSSIAGMFCF WRGDIVFEFQ 
361:	VFCTKYHSGR LMFVYVPGDE NTKISTLTAK QASSGLTAVF DINGVNSTLV FRCPFISDTP 
421:	YRVNPTTHKS LWPYATGKLV CYVYNRLNAP ASVSPSVSIN VYKSAVDLEL YAPVYGVSPT 
481:	NTSVFAQGKE DEGGFSSVPE VEQHVVEDKE PQGPLHVTPF GAVKAMEDPQ LARKTPGTFP 
541:	ELAPGKPRHT VDHMDLYKFM GRAHYLWGHK FTKTDMQYTF QIPLSPIKEG FVTGTLRWFL 
601:	SLFQLYRGSL DITMTFAGKT NVDGIVYFVP EGVAIETERE EQTPLLTLNY KTSVGAIRFN 
661:	TGQTTNVQFR IPFYTPLEHI ATHSKNAMDS VLGAITTQIT NYSAQDEYLQ VTYYISFNED 
721:	SQFSVPRAVP VVSSFTDTSS KTVMNTYWLD DDELVEESSH SSFDEIEEAQ CSKCKMDLGD 
781:	IVSCSGEKAK HFGVYVGDGV VHVDPEGNAT NWFMKRKATV KKSKNLDKWC FALSPRIDRT 
841:	LICETANLMV GREVEYDIFV KNCETYARGI ASGDYGTKEG EKWKTLLSAV GVAAMTTTMM 
901:	AMRHELLDTS LTKLPQKVGE VTNEVRKILE DTSAGVREFK EKVSSILRKT WPGKTSIKIM 
961:	KWTCRIVKMC VGVGLCYAHG WDSKTVTAVV TMFSMDFLDL VIDGIEIGRM IIDELTTPKA 
1021:	QGLSEINQVL SIAKNAKDVI KMLIEIFCKV IERITGEHGK KIQWAQDKKE EIMNVLERAE 
1081:	KWITTSDDHS EGIECLKLVR SIQSVIRGEE SLKELAGELR AVGTHVLNKL GRLDKPNAPI 
1141:	LVRAEPTVLY LYGNRGGGKS LASMAIAVKL CKELGISHVE GIYTKPIMSD FWDGYAGQPV 
1201:	VIMDDLGQST SDEDWTNFCQ LVSSCPLRLN MANLEKKGTQ FNSPFIIASS NLSHPCPKTV 
1261:	YCTDAIARRL HIKVKVSPKE EFSTHAMLDV AKAKKAGAYC NLDCLDFQKI SDLASTPVSV 
1321:	QDIVLEMLHT NVDKQTLMGD IIQYWAQSNP REVFDTMAEG KNSGKYLWLF EKIKTSKWYI 
1381:	LGCVGAVLSV SVLGVFAYHM IKNHFRDQQH DQSAYSAAIK PLRVVRLEQS DAQSVVDISN 
1441:	VVHGNLVRVG VGPNEARIHW LYNGLGVYDT YILMPYHGIK DADVDDDLYI ERAGTIYSTN 
1501:	MKMVQVLFLE SREGDLVLIN VPRLPKFRDI RNHFSTEENI RRAEGMPGTL CTLDHERFTL 
1561:	VTESDLKMVE AATYVCEDDK GVRTDISVGR SWKAKACTVA GMCGGALVTS NNKMQNAIVG 
1621:	IHVAGGAHAI SRVITKEMIE EMLKTRAQCS RIWKTEFVEE KISVGSKTKY HKSPLYDFCP 
1681:	QEVIKCPTKL FYQGEIDVMQ VMLAKYSSPI VSEPLGYATV VEAYTNRMVS FFSEPRQLTY 
1741:	DECINGIEGL DAIDLKTSAG FPYNTLGLRK SDLIINGKMA QRLQQDVEKM EEDLHMNRSI 
1801:	QVVFTTCAKD ELRPLSKVML GKTRAIEACP VSFTILFRRY LGYALAQIQS HPGFHTGIAV 
1861:	GVDPDQDWHC MWYSIVTQCD LVVGLDFSNY DASLSPFMIY HAGRVLGQIC GLDPRLVDRI 
1921:	MEPIVNSVHQ LGSMRYYVHG SMPSGTPATS VLNSIINVVN ICHVLCALEK ISVFEVFKLF 
1981:	KILTYGDDVL LCIKKEYLDQ KSFPLSSFVQ GLEELGLSPT GADKMEVKVT PVHKMSFLKR 
2041:	TFYVDEWSIC HPRISEETVY SMLAWKSDNA SMKDLIETSI WFMFHHGPRK YVRFCTWLRG 
2101:	VLCRVGIGLY IPTYKELEVR YDRLVKYRFI DDSF