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Accession Number: | O35433 |
Protein Name: | VR1 |
Length: | 838 |
Molecular Weight: | 94948.00 |
Species: | Rattus norvegicus (Rat) [10116] |
Number of TMSs: | 7 |
Location1 / Topology2 / Orientation3: | Cell membrane1 / Multi-pass membrane protein2 |
Substrate | calcium(2+), sodium(1+), proton |
Cross database links:
DIP: | DIP-46106N |
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RefSeq: | NP_114188.1 |
Entrez Gene ID: | 83810 |
Pfam: | PF00023 |
KEGG: | rno:83810 |
Gene Ontology
GO:0005829
C:cytosol
GO:0030425
C:dendrite
GO:0016021
C:integral to membrane
GO:0043025
C:neuronal cell body
GO:0005886
C:plasma membrane
GO:0045202
C:synapse
GO:0005524
F:ATP binding
GO:0005262
F:calcium channel activity
GO:0005516
F:calmodulin binding
GO:0017081
F:chloride channel regulator activity
GO:0006816
P:calcium ion transport
GO:0071363
P:cellular response to growth factor stimulus
GO:0071502
P:cellular response to temperature stimulus
GO:0007204
P:elevation of cytosolic calcium ion concentr...
GO:0014047
P:glutamate secretion
GO:0001774
P:microglial cell activation
GO:0090212
P:negative regulation of establishment of blo...
GO:0043065
P:positive regulation of apoptosis
GO:0060454
P:positive regulation of gastric acid secretion
GO:0045429
P:positive regulation of nitric oxide biosynt...
GO:0009408
P:response to heat
GO:0043434
P:response to peptide hormone stimulus
GO:0009268
P:response to pH
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References (22)[1] “The capsaicin receptor: a heat-activated ion channel in the pain pathway.” Caterina M.J.et.al. 9349813 [2] “Molecular cloning of an N-terminal splice variant of the capsaicin receptor. Loss of N-terminal domain suggests functional divergence among capsaicin receptor subtypes.” Schumacher M.A.et.al. 10644739 [3] “Propofol activates vanilloid receptor channels expressed in human embryonic kidney 293 cells.” Tsutsumi S.et.al. 11578842 [4] “The genomic organization of the gene encoding the vanilloid receptor: evidence for multiple splice variants.” Xue Q.et.al. 11549313 [5] “Identification of an aspartic residue in the P-loop of the vanilloid receptor that modulates pore properties.” Garcia-Martinez C.et.al. 10931826 [6] “Induction of vanilloid receptor channel activity by protein kinase C.” Premkumar L.S.et.al. 11140687 [7] “Biochemical characterization of the vanilloid receptor 1 expressed in a dorsal root ganglia derived cell line.” Jahnel R.et.al. 11683872 [8] “Bradykinin and nerve growth factor release the capsaicin receptor from PtdIns(4,5)P2-mediated inhibition.” Chuang H.H.et.al. 11418861 [9] “Direct phosphorylation of capsaicin receptor VR1 by protein kinase Cepsilon and identification of two target serine residues.” Numazaki M.et.al. 11884385 [10] “Protein kinase C(alpha) is required for vanilloid receptor 1 activation. Evidence for multiple signaling pathways.” Olah Z.et.al. 12095983 [11] “cAMP-dependent protein kinase regulates desensitization of the capsaicin receptor (VR1) by direct phosphorylation.” Bhave G.et.al. 12194871 [12] “Structural determinant of TRPV1 desensitization interacts with calmodulin.” Numazaki M.et.al. 12808128 [13] “Protein kinase C phosphorylation sensitizes but does not activate the capsaicin receptor transient receptor potential vanilloid 1 (TRPV1).” Bhave G.et.al. 14523239 [14] “A modular PIP2 binding site as a determinant of capsaicin receptor sensitivity.” Prescott E.D.et.al. 12764195 [15] “Modulation of TRPV1 by nonreceptor tyrosine kinase, c-Src kinase.” Jin X.et.al. 15084474 [16] “Agonist recognition sites in the cytosolic tails of vanilloid receptor 1.” Jung J.et.al. 12228246 [17] “Phosphorylation of vanilloid receptor 1 by Ca2+/calmodulin-dependent kinase II regulates its vanilloid binding.” Jung J.et.al. 14630912 [18] “Molecular determinants of vanilloid sensitivity in TRPV1.” Gavva N.R.et.al. 14996838 | |
Structure: | |
[...more] |
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MEQRASLDSE ESESPPQENS CLDPPDRDPN CKPPPVKPHI FTTRSRTRLF GKGDSEEASP 61: LDCPYEEGGL ASCPIITVSS VLTIQRPGDG PASVRPSSQD SVSAGEKPPR LYDRRSIFDA 121: VAQSNCQELE SLLPFLQRSK KRLTDSEFKD PETGKTCLLK AMLNLHNGQN DTIALLLDVA 181: RKTDSLKQFV NASYTDSYYK GQTALHIAIE RRNMTLVTLL VENGADVQAA ANGDFFKKTK 241: GRPGFYFGEL PLSLAACTNQ LAIVKFLLQN SWQPADISAR DSVGNTVLHA LVEVADNTVD 301: NTKFVTSMYN EILILGAKLH PTLKLEEITN RKGLTPLALA ASSGKIGVLA YILQREIHEP 361: ECRHLSRKFT EWAYGPVHSS LYDLSCIDTC EKNSVLEVIA YSSSETPNRH DMLLVEPLNR 421: LLQDKWDRFV KRIFYFNFFV YCLYMIIFTA AAYYRPVEGL PPYKLKNTVG DYFRVTGEIL 481: SVSGGVYFFF RGIQYFLQRR PSLKSLFVDS YSEILFFVQS LFMLVSVVLY FSQRKEYVAS 541: MVFSLAMGWT NMLYYTRGFQ QMGIYAVMIE KMILRDLCRF MFVYLVFLFG FSTAVVTLIE 601: DGKNNSLPME STPHKCRGSA CKPGNSYNSL YSTCLELFKF TIGMGDLEFT ENYDFKAVFI 661: ILLLAYVILT YILLLNMLIA LMGETVNKIA QESKNIWKLQ RAITILDTEK SFLKCMRKAF 721: RSGKLLQVGF TPDGKDDYRW CFRVDEVNWT TWNTNVGIIN EDPGNCEGVK RTLSFSLRSG 781: RVSGRNWKNF ALVPLLRDAS TRDRHATQQE EVQLKHYTGS LKPEDAEVFK DSMVPGEK