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1.A.53.1.10
Channel forming Hepatitis C virus NS4a peptide (54 aas) (viroportin NS4a).  The NS4a peptide has been shown to form pores (Madan et al. 2007). This protein is a peptide fragment of the large glycoproteins of the Hepatitis C Virus.

Accession Number:D2K2A7
Protein Name:Non-structural protein 4A
Length:54
Molecular Weight:5824.00
Species:Hepatitis C virus [11103]
Number of TMSs:1
Substrate

Cross database links:

Pfam: PF01006   

Gene Ontology

GO:0044423 C:virion part
GO:0016032 P:viral reproduction

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	STWVLLGGVL AALAAYCLSV GCVVIVGHIE LEGKPALVPD KEVLYQQYDE MEEC