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| Accession Number: | P12871 |
| Protein Name: | Chain F |
| Length: | 399 |
| Molecular Weight: | 43067.00 |
| Species: | Nodamura virus (NoV) [12288] |
| Number of TMSs: | 1 |
| Location1 / Topology2 / Orientation3: | Virion1 |
| Substrate | ion, molecule |
Cross database links:
| RefSeq: | NP_077732.1 |
|---|---|
| Entrez Gene ID: | 962119 |
| Pfam: | PF01829 |
Gene Ontology
GO:0019028
C:viral capsid
GO:0004190
F:aspartic-type endopeptidase activity
GO:0006508
P:proteolysis
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References (3)[1] “Nucleotide sequences of three Nodavirus RNA2's: the messengers for their coat protein precursors.” Dasgupta R.et.al. 2798110 [2] “Structural homology among four nodaviruses as deduced by sequencing and X-ray crystallography.” Kaesberg P.et.al. 2116525 [3] “Resolution of space-group ambiguity and the structure determination of nodamura virus to 3.3-A resolution from pseudo-R32 (monoclinic) crystals.” Zlotnick A.et.al. 15299863
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| Structure: | |
External Searches:
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Analyze:
| Predict TMSs (Predict number of transmembrane segments) | ||||
| FASTA formatted sequence |
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1: MVSKAARRRR AAPRQQQRQQ SNRASNQPRR RRARRTRRQQ RMAATNNMLK MSAPGLDFLK 61: CAFASPDFST DPGKGIPDKF QGLVLPKKHC LTQSITFTPG KQTMLLVAPI PGIACLKAEA 121: NVGASFSGVP LASVEFPGFD QLFGTSATDT AANVTAFRYA SMAAGVYPTS NLMQFAGSIQ 181: VYKIPLKQVL NSYSQTVATV PPTNLAQNTI AIDGLEALDA LPNNNYSGSF IEGCYSQSVC 241: NEPEFEFHPI MEGYASVPPA NVTNAQASMF TNLTFSGARY TGLGDMDAIA ILVTTPTGAV 301: NTAVLKVWAC VEYRPNPNST LYEFARESPA NDEYALAAYR KIARDIPIAV ACKDNATFWE 361: RVRSILKSGL NFASTIPGPV GVAATGIKGI IETIGSLWV