TCID | Name | Domain | Kingdom/Phylum | Protein(s) |
---|---|---|---|---|
1.C.137.1.1 | Gasdermin bGSDM of 259 aas and 1 possible TMS at residue 85. It is the precursor of a pore-forming protein involved in defense against bacteriophages. Expression of gasdermin bGSDM and the neighboring protease gene (Ga0098714_109514) is toxic in E.coli on solid medium (Johnson et al. 2022). Cleavage of this precursor by its dedicated protease releases the active moiety (gasdermin bGSDM, N-terminus), which inserts into membranes, forming pores and triggering cell death. | Bacteria |
Pseudomonadota | Gasdermin bGSDM of Bradyrhizobium tropiciagri |
1.C.137.1.2 | Uncharacterized protein of 267 aas and 1 possible TMS near the C-terminus of the protein. | Bacteria |
Pseudomonadota | UP of Ruegeria atlantica |
1.C.137.1.3 | Uncharacterized protein of 272 aas and 1 or 2 moderately hydrophobic TMSs near the C-terminus of the protein. | Bacteria |
Pseudomonadota | UP of Thiococcus pfennigii |
1.C.137.1.4 | Uncharacterized protein of 271 aas and possible 3 TMSs, one at about residue 90, and two between residues 190 and 225. | Bacteria |
Pseudomonadota | UP of Lysobacter enzymogenes |
1.C.137.1.5 | Uncharacterized protein of 267 aas and at least 1 possible TMS between residues 80 and 100, and possibly several less hydrophobic peaks towards the C-terminus of the protein. | Bacteria |
Bacteroidota | UP of Spirosoma sp. KCTC 72228 |
1.C.137.1.6 | Uncharacterized protein of 272 aas with no strongly hydrophobic peaks that could be TMSs. | Bacteria |
Pseudomonadota | UP of Azospirillum picis |
1.C.137.1.7 | Uncharacterized protein of 267 aas with possibly two TMSs between residues 80 and 120. | Bacteria |
Thermodesulfobacteriota | UP of Geobacter sp. |
1.C.137.1.8 | Gasdermin of 268 aas and possibly one TMS at residue 225. The 3-D structure has been determined (PDB# 7N52_A; Johnson et al. 2022). | Bacteria |
Bacteroidota | Gasdermin of Runella zeae |
1.C.137.1.9 | Uncharacterized protein of 266 aas and possibly 1 or 2 TMSs. | Bacteria |
Bacteroidota | UP of Cytophagia bacterium (microbial mat metagenome) |
1.C.137.1.10 | Uncharacterized protein of 350 aas and 1 putative TMS. | Bacteria |
Actinomycetota | UP of Streptomyces sp. DSM 40750 |
1.C.137.1.11 | Uncharacterized protein of 233 aas and one possible TMS at about residue 80. | Bacteria |
Bacteroidota | UP of Mangrovivirga sp. M17 |
1.C.137.1.12 | Uncharacterized protein of 286 aas and possibly 1 or 2 TMSs. | Bacteria |
Pseudomonadota | UP of Methylobacteriaceae |
1.C.137.1.13 | Uncharacterized protein of 233 aas and possibly 3 TMSs, 2 between residues 80 and 130, and one C-terminal. | Archaea |
Euryarchaeota | UP of Methanomicrobiales archaeon |
1.C.137.1.14 | Uncharacterized protein of 249 aas and possibly as many as 3 mderately hydrophobic TMSs, two between residues 150 and 190, and one more at the C-terminus. | Bacteria |
Candidatus Coatesbacteria | UP of Candidatus Coatesbacteria bacterium |
1.C.137.1.15 | Uncharacterized protein of 258 aas and possibly 3 TMSs, two near the N-terminus (residues 10 - 50). This protein shows sequence similarity with members of TC subclasses 1, 2, 4, and 5 in family 1.C.137. | Bacteria |
Bacteroidota | UP of Pinibacter aurantiacus |
1.C.137.1.16 | Uncharacterized protein of 288 aas and possibly two TMSs, one N-terminal and one at about residue 120. | Bacteria |
Acidobacteriota | UP of Acidobacteriota bacterium (soil metagenome) |
1.C.137.2.1 | Uncharacterized protein of 263 aas and 1 TMS at the N-terminus of the protein. | Bacteria |
Pseudomonadota | UP of Vibrio campbellii |
1.C.137.2.2 | Uncharacterized protein of 252 aas and 1 N-terminal TMS. | Bacteria |
Deferribacterota | UP of Calditerrivibrio nitroreducens |
1.C.137.2.3 | Uncharacterized protein of 296 aas and 1 N-terminal TMS + two possible TMSs of lesser hydrophobicity. | Bacteria |
Planctomycetota | UP of Planctomycetota bacterium |
1.C.137.2.4 | Uncharacterized protein of 264 aas and possibly 3 TMSs, one N-terminal and two between residues 100 and 145. | Bacteria |
Bacteroidota | UP of Cyclobacteriaceae bacterium (bioreactor metagenome) |
1.C.137.3.1 | Uncharacterized protein of 249 aas and possibly 1 C-terminal TMS. | Bacteria |
Bacteroidota | UP of Bacteroidetes bacterium |
1.C.137.3.2 | Uncharacterized protein of 276 aas and an unknown number of TMSs. | Bacteria |
Planctomycetota | UP of Pirellulaceae bacterium (hot springs metagenome) |
1.C.137.3.3 | Uncharacterized protein of 276 aas and possibly three moderately hydrophobic TMSs at residues 90, 160 and 230. | Bacteria |
Bacteroidota | UP of Bacteroidetes bacterium (phycosphere metagenome) |
1.C.137.4.1 | Uncharacterized protein of 282 aas and possibly 1 C-terminal TMS. | Bacteria |
Bacteroidota | UP of Sphingobacteriales bacterium |
1.C.137.4.2 | Uncharacterized protein of 264 aas and possibly 2 TMSs between residues 10 and 50. This protein shows sequence similarity between subfamilies 1 and 3 in family 1.C.137. | Bacteria |
Bacteroidota | UP of Chitinophagales bacterium |
1.C.137.5.1 | Uncharacterized protein of 263 aas and 1 or 2 TMSs. | Bacteria |
Myxococcota | UP of Nannocystis sp. SCPEA4 |
1.C.137.5.2 | Uncharacterized protein of 257 aas and possibly 1, 2, or 3 TMSs, one N-terminal and two between residues 75 and 110. This protein shows appreciable sequence similarity with members of TC subfamily 1.C.137.1. | Bacteria |
Planctomycetota | UP of Gemmataceae bacterium |
1.C.137.5.3 | Uncharacterized protein of 216 aas and possibly 1 N-terminal TMS. | Bacteria |
Vulcanimicrobiota | UP of Candidatus Eremiobacteraeota bacterium |
1.C.137.5.4 | Uncharacterized protein of 272 aas and possibly 1 TMS at about residue 70. | Bacteria |
Pseudomonadota | UP of Pseudomonadota bacterium (soil metagenome) |
1.C.137.6.1 | Uncharacterized protein of 259 aas and possibly 3 TMSs, one N-terminal and two between residues 100 - 140. | Bacteria |
Actinomycetota | UP of Kribbella monticola |
1.C.137.6.2 | Uncharacterized protein of 323 aas with possibly 3 TMSs, one N-terminal, one at residue 80 snf one at residue 160. | Bacteria |
Bacillota | UP of Acetobacterium sp. |
1.C.137.6.3 | Uncharacterized protein of 250 aas and possibly 3 TMSs in the N-terminal half of the protein. | Bacteria |
Actinomycetota | UP of Streptomyces sp. |