TCID | Name | Domain | Kingdom/Phylum | Protein(s) |
---|---|---|---|---|
1.W.6.1.1 | The Bacillus phage phi29 (φ29) portal protein of 309 aas. It forms the portal vertex of the capsid (Ibarra et al. 2000; Fu and Prevelige 2009; Grimes et al. 2011). This portal plays roles in head assembly, genome packaging, neck/tail attachment, and genome ejection. The portal protein multimerizes as a single ring-shaped homododecamer arranged around a central channel (Guasch et al. 2002, Grimes et al. 2011). It binds to the 6 packaging RNA molecules (pRNA), forming a double-ring structure which in turn binds to the ATPase gp16 hexamer, forming the active DNA-translocating motor (Xiao et al. 2005, Simpson et al. 2000). This complex is essential for the specificity of packaging from the left DNA end. | Viruses |
Heunggongvirae, Uroviricota | PPP of Bacillus phage phi29 |
1.W.6.1.2 | Uncharacterized protein of 358 aas | Bacteria |
Candidatus Melainabacteria | UP of Candidatus Melainabacteria bacterium (human gut metagenome) |
1.W.6.1.3 | Capsid and scaffold protein of 344 aa | Viruses |
Heunggongvirae, Uroviricota | Capsid protein of Enterococcus phage vB_EfaP_Efmus1 |
1.W.6.2.1 | Uncharacterized protein of 309 aas | Bacteria |
Mycoplasmatota | UP of endosymbiont GvMRE |
1.W.6.2.2 | Uncharacterized protein of 310 aas | Bacteria |
Mycoplasmatota | UP of endosymbiont GvMRE of Glomus versiforme |
1.W.6.3.1 | Uncharacterized protein of 334 aas | Bacteria |
Mycoplasmatota | UP of Mycoplasmataceae bacterium CE_OT135 (symbiont metagenome) |
1.W.6.3.2 | Uncharacterized protein of 306 aas | Bacteria |
Mycoplasmatota | UP of endosymbiont DhMRE of Dentiscutata heterogama |
1.W.6.3.3 | Uncharacterized protein of 275 aas | Eukaryota |
Fungi, Ascomycota | UP of Terfezia boudieri |
1.W.6.4.1 | Uncharacterized protein of 700 aas | Eukaryota |
Fungi, Ascomycota | UP of Pseudogymnoascus verrucosus |
1.W.6.4.2 | Uncharacterized protein of 643 aas | Eukaryota |
Fungi, Basidiomycota | UP of Kalmanozyma brasiliensis |