TCDB is operated by the Saier Lab Bioinformatics Group
TCIDNameDomainKingdom/PhylumProtein(s)
2.A.13.1.1









The anaerobic C4-dicarboxylate antiporter (aspartate:fumarate antiporter; 433 aas and 12 TMSs), DctA, can catalyze both uptake and exchange (Zientz et al. 1996). The DcuS-DcuR two component system (sensor kinase-response regulator) responds to C4-dicarboxylates in a process that requires formation of a complex of DcuS with C4-dicarboxylate transporter, DctA or DcuB (Wörner et al. 2018). DcuS is in the constitutive "on" state unless complexed with DctA, in which case it becomes fumarate-sensitive (Stopp et al. 2021).

Bacteria
Proteobacteria
DcuA of E. coli (P0ABN5)
2.A.13.1.2









Anaerobic C4-dicarboxylate uptake/efflux porter, DcuB. Also catalyzes substrate:substrate antiport (fumarate:malate or fumarate:succinate antiport), but it is also a cosensor for the sensor kinase, DcuS (Kleefeld et al. 2009; Bauer et al. 2011; Chen et al. 2014) It has 12 established TMSs where the loop between TMSs 11 and 12 is the sensor. A central water-filled cavity may provide the transport pathway. The sensory domain of DcuB is composed of cytoplasmic loop XI/XII and a membrane integral region with the regulatory residues Thr396/Asp398 and Lys353. Also transports D-tartrate (Bauer et al. 2011; Kim et al. 2007).  The DcuB-DcuS interaction has been reviewed (Unden et al. 2016). The DcuS-DcuR two component system (sensor kinase-response regulator) responds to C4-dicarboxylates in a process that requires formation of the complex of DcuS with C4-dicarboxylate transporters DctA or DcuB (Bauer et al. 2011; Chen et al. 2014) It has 12 established TMSs where the loop between TMSs 11 and 12 is the sensor. A central water-filled cavity may provide the transport pathway. The sensory domain of DcuB is composed of cytoplasmic loop XI/XII and a membrane integral region with the regulatory residues Thr396/Asp398 and Lys353. Also transports D-tartrate (Bauer et al. 2011; Kim et al. 2007).  The DcuB-DcuS interaction has been reviewed (Unden et al. 2016). The DcuS-DcuR two component system (sensor kinase-response regulator) responds to C4-dicarboxylates in a process that requires formation of the complex of DcuS with C4-dicarboxylate transporters DctA or DcuB (Wörner et al. 2018).

Bacteria
Proteobacteria
DcuB of E. coli (P0ABN9)
2.A.13.1.3









C4-dicarboxylate transporter, YhiT (probably transports succinate, fumarate, aspartate, asparagine, carbamoyl phosphate and dihydroorotate; Zaharik et al., 2007)

Bacteria
Proteobacteria
YhiT of Salmonella enterica
(Q8ZLD2)
2.A.13.1.4









Uncharacterized C4-dicarboxylic acid transporter of 445 aas and 11 TMSs.

Bacteria
Actinobacteria
UP of Saccharothrix espanaensis
2.A.13.1.5









Dicarboxylate transporter, DcuA of 445 aas and 11 TMSs.  Takes up aspartate under low (0.3%) oxygen conditions; is regulated in response to oxygen and nitrate mediated by the RacR/RacS sensor kinase/response regulatory pair (Wösten et al. 2017).

Bacteria
Proteobacteria
DcuA of Campylobacter jejuni
2.A.13.1.6









Dicarboxylate transporter, DcuB of 474 aas and 11 TMSs.  Takes up aspartate and secretes succinate.  Subject to regulation in response to oxygen and nitrate, mediated by the sensor kinase/response regulator pair, RacR/RacS (Wösten et al. 2017).

Bacteria
Proteobacteria
DcuB of Campylobacter jejuni
2.A.13.2.1









Uncharacterized protein of 386 aas and 10 TMSs.

Bacteria
Bacteroidetes/Chlorobi group
UP of Cardinium endosymbiont cEper1 of Encarsia pergandiella