TCID | Name | Domain | Kingdom/Phylum | Protein(s) |
---|---|---|---|---|
2.A.13.1.1 | The anaerobic C4-dicarboxylate antiporter (aspartate:fumarate antiporter; 433 aas and 12 TMSs), DctA, can catalyze both uptake and exchange (Zientz et al. 1996). The DcuS-DcuR two component system (sensor kinase-response regulator) responds to C4-dicarboxylates in a process that requires formation of a complex of DcuS with C4-dicarboxylate transporter, DctA or DcuB (Wörner et al. 2018). DcuS is in the constitutive "on" state unless complexed with DctA, in which case it becomes fumarate-sensitive (Stopp et al. 2021). | Bacteria |
Proteobacteria | DcuA of E. coli (P0ABN5) |
2.A.13.1.2 | Anaerobic C4-dicarboxylate uptake/efflux porter, DcuB. Also catalyzes substrate:substrate antiport (fumarate:malate or fumarate:succinate antiport), but it is also a cosensor for the sensor kinase, DcuS (Kleefeld et al. 2009; Bauer et al. 2011; Chen et al. 2014) It has 12 established TMSs where the loop between TMSs 11 and 12 is the sensor. A central water-filled cavity may provide the transport pathway. The sensory domain of DcuB is composed of cytoplasmic loop XI/XII and a membrane integral region with the regulatory residues Thr396/Asp398 and Lys353. Also transports D-tartrate (Bauer et al. 2011; Kim et al. 2007). The DcuB-DcuS interaction has been reviewed (Unden et al. 2016). The DcuS-DcuR two component system (sensor kinase-response regulator) responds to C4-dicarboxylates in a process that requires formation of the complex of DcuS with C4-dicarboxylate transporters DctA or DcuB (Bauer et al. 2011; Chen et al. 2014) It has 12 established TMSs where the loop between TMSs 11 and 12 is the sensor. A central water-filled cavity may provide the transport pathway. The sensory domain of DcuB is composed of cytoplasmic loop XI/XII and a membrane integral region with the regulatory residues Thr396/Asp398 and Lys353. Also transports D-tartrate (Bauer et al. 2011; Kim et al. 2007). The DcuB-DcuS interaction has been reviewed (Unden et al. 2016). The DcuS-DcuR two component system (sensor kinase-response regulator) responds to C4-dicarboxylates in a process that requires formation of the complex of DcuS with C4-dicarboxylate transporters DctA or DcuB (Wörner et al. 2018). | Bacteria |
Proteobacteria | DcuB of E. coli (P0ABN9) |
2.A.13.1.3 | C4-dicarboxylate transporter, YhiT (probably transports succinate, fumarate, aspartate, asparagine, carbamoyl phosphate and dihydroorotate; Zaharik et al., 2007) | Bacteria |
Proteobacteria | YhiT of Salmonella enterica (Q8ZLD2) |
2.A.13.1.4 | Uncharacterized C4-dicarboxylic acid transporter of 445 aas and 11 TMSs. | Bacteria |
Actinobacteria | UP of Saccharothrix espanaensis |
2.A.13.1.5 | Dicarboxylate transporter, DcuA of 445 aas and 11 TMSs. Takes up aspartate under low (0.3%) oxygen conditions; is regulated in response to oxygen and nitrate mediated by the RacR/RacS sensor kinase/response regulatory pair (Wösten et al. 2017). | Bacteria |
Proteobacteria | DcuA of Campylobacter jejuni |
2.A.13.1.6 | Dicarboxylate transporter, DcuB of 474 aas and 11 TMSs. Takes up aspartate and secretes succinate. Subject to regulation in response to oxygen and nitrate, mediated by the sensor kinase/response regulator pair, RacR/RacS (Wösten et al. 2017). | Bacteria |
Proteobacteria | DcuB of Campylobacter jejuni |
2.A.13.2.1 | Uncharacterized protein of 386 aas and 10 TMSs. | Bacteria |
Bacteroidetes/Chlorobi group | UP of Cardinium endosymbiont cEper1 of Encarsia pergandiella |