TCDB is operated by the Saier Lab Bioinformatics Group
TCIDNameDomainKingdom/PhylumProtein(s)
3.D.2.1.1









H+-translocating transhydrogenase, α2β2 heterotetrameric PTH. Ligand binding and conformational dynamics of the enzyme have been revealed by hydrogen/deuterium exchange mass spectrometry (Zöller et al. 2022).

Bacteria
Pseudomonadota
α2β2 heterotetrameric PTH of E. coli
3.D.2.2.1









H+-translocating transhydrogenase
Bacteria
Pseudomonadota
(α1)2(α2)2β2 heterohexameric PTH of Rhodospirillum rubrum
3.D.2.2.2









H+-transporting NADH/NADP Transhydrogenase, PntA1 (α1)/PntA2 (α2)/PntB (β).  A 3-d structure is available (Leung et al. 2015). Another structre (2.2 Å resolution) revealed conformational changes of helix positions from the previous structure solved at pH 8.5, and  internal water molecules interacting with residues implicated in proton translocation. Water flows across a narrow pore and a hydrophobic "dry" region in the middle of the membrane channel, with key residues His42alpha2 (chain A) being protonated and Thr214beta (chain B) displaying a conformational change, respectively, to gate the channel access to both cytoplasmic and periplasmic chambers. Mutation of Thr214beta to Ala deactivated the enzyme (Padayatti et al. 2017).

Bacteria
Deinococcota
Transhydrogenase of Thermus thermophilus
α1 subunit of 375 aas (Q72GR8)
α2 subunit of 100 aas (Q72GR9)
β subunit of 450 aas (Q72GS0)
3.D.2.3.1









H+-translocating transhydrogenase
Eukaryota
Metazoa, Chordata
Homodimeric PTH of Bos taurus
3.D.2.4.1









H+-translocating transhydrogenase
Eukaryota
Apicomplexa
PTH of Eimeria tenella