# Makefile from Progressive Alignment of Amino Acid
# Sequences and Construction of Phylogenetic Trees
# from Them, by D. F. Feng and R. F. Doolittle,
# Methods of Enzymology, v266, p368 (1996)
default:	all
all: align.c arrange2000.c blen.c btree.c
	gcc align.c -o align
	gcc arrange2000.c -o arrange2000 -lm
	gcc blen.c -o blen -lm
	gcc btree.c -o btree -lm
	gcc clus.c -o clus
	gcc crop.c -o crop
	gcc format.c -o format
	gcc inspect.c -o inspect
	gcc mulpub.c -o mulpub
	gcc noneg.c -o noneg -lm
	gcc prealign.c -o prealign
	gcc setree.c -o setree
	gcc tree2000.c -o tree2000 -lm