1.E.72. The Archaeal/Bacterial 4 TMS Putative Holin (AB4Holin) Family
The AB-4Holin family includes many small proteins, all of which have 4 TMSs per polypeptide chain. Homology with SMR-like proteins has been considered but not established, while sequence similarities with holins in Holin III Superfamily are considerable. Additional bacterial homologues may be found in other TC Families containing 4 TMS members. Other homologs may have 3 TMSs because these sequences are not complete. TC family 9.B.106 members have 3 or 4 TMSs with C-terminal hydrophylic domains, and the N-terminal TMSs may be homologous to those of members of Holin family 1.E.72.
Archaeal 4 TMS protein of 171 aas
4 TMS protein of Natrialba magadii (Natronobacterium magadii)
SPW repeat protein of 157 aas and 4 TMSs.
UP of Natrialba taiwanensis
Uncharacterized protein of 184 aas and 4 TMSs.
UP of Saccharomonospora marina
SPW repeat protein of 110 aas and 3 or 4 TMSs
SPW repeat protein of Natronococcus jeotgali
Uncharacterized protein of 121 aas and 4 TMSs
UP of Nitrolancea hollandica
SPW repeat protein of 119 aas and 4 TMSs, Gp25
Proteobacteria
SPW repeat protein, Gp25, of Rhizobium mesoamericanum
Uncharacterized protein of 133 aas and 4 TMSs.
UP of Kutzneria albida