9.B.295. The Archaeal 6/7 TMS Protein (Ar6/7) Family
The proteins of the Ar6/7 family have 6 or 7 TMSs and are somewhat longer than 200 residues. With a second iteration of an NCBI PSI-BLAST search, RodA proteins come up with low scores almost exclusively, suggestion that this family may be related to family TC# 2.A.103.
Uncharacterized protein of 238 aas and 7 TMSs.
UP of Candidatus Lokiarchaeota archaeon CR_4 (sediment metagenome)
Uncharacterized protein of 239 aas and 7 TMSs
UP of Lokiarchaeum sp. GC14_75
Uncharacterized protein of 208 aas and 6 TMSs.
UP of Lokiarchaeum sp. GC14_75
Uncharacterized protein of 179 aas and 5 TMSs
UP of Candidatus Lokiarchaeota archaeon CR_4 (sediment metagenome)
Uncharacterized protein of 230 aas and 7 TMSs
UP of Candidatus Helarchaeota archaeon (marine sediment)
Uncharacterized protein of 239 aas and 6 or 7 TMSs, with a hydropathy plot resembling those of 6 TMSs VIC family proteins (TC# 1.A.1). Also VIC family proteins come up in TC BLAST searches with a score of 0.0001. Thus, this protein, and maybe all membeers of the family, may be VIC-type pore proteins.
UP of Candidatus Lokiarchaeota archaeon (sediment metagenome)