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3.D.4.3.3
Cbb3 cytochrome c oxidase (COX; Cbb3; CcoNOP).  The 3-d structure is known to 3.2 Å resolution (PDB# 3MK7; 5DJQ) (Buschmann et al. 2010Lee et al., 2012).  The structure explains a proton-pumping mechanism and the high activity of family-C heme-copper oxidases compared to that of families A and B (Buschmann et al., 2010Lee et al., 2012). A small subunit of 36 aas and 1 TMS, CcoM, was identified in the structure and plays a role in assembly and stability (Kohlstaedt et al. 2016; Carvalheda and Pisliakov 2017). CcoQ, another small protein of 62 aas (acc # F8H837) is an assembly factor for Cbb3-1 and Cbb3-2 (Kohlstaedt et al. 2017). The A-, B- and C-type oxygen reductases each have an active-site tyrosine that forms a unique cross-linked histidine-tyrosine cofactor. In the C-type oxygen reductases (also called cbb3 oxidases), this post-translationally generated co-factor occurs in a different TMS than for the A- and B-type reductases (Hemp et al. 2006).

Accession Number:D9IA45
Protein Name:Cbb3-type cytochrome c oxidase subunit CcoP1
Length:311
Molecular Weight:33663.00
Species:Pseudomonas stutzeri [316]
Number of TMSs:2
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate hydron, proton

Cross database links:

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0070469 C:respiratory chain
GO:0009055 F:electron carrier activity
GO:0020037 F:heme binding
GO:0016491 F:oxidoreductase activity
GO:0022900 P:electron transport chain
GO:0015992 P:proton transport

References (1)

[1] “The structure of cbb3 cytochrome oxidase provides insights into proton pumping.”  Buschmann S.et.al.   20576851
Structure:
3MK7   5DJQ     

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSTFWSGYIA LLTLGTIVAL FWLIFATRKG ESAGTTDQTM GHAFDGIEEY DNPLPRWWFL 
61:	LFIGTLVFGI LYLVLYPGLG NWKGVLPGYE GGWTQEKQWE REVAQADEKY GPIFAKYAAM 
121:	SVEEVAQDPQ AVKMGARLFA NYCSICHGSD AKGSLGFPNL ADQDWRWGGD AASIKTSILN 
181:	GRIAAMPAWG QAIGEEGVKN VAAFVRKDLA GLPLPEGTDA DLSAGKNVYA QTCAVCHGQG 
241:	GEGMAALGAP KLNSAAGWIY GSSLGQLQQT IRHGRNGQMP AQQQYLGDDK VHLLAAYVYS 
301:	LSQKPEQLAN Q