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3.D.4.3.3
Cbb3 cytochrome c oxidase (COX; Cbb3; CcoNOP).  The 3-d structure is known to 3.2 Å resolution (PDB# 3MK7; 5DJQ) (Buschmann et al. 2010Lee et al., 2012).  The structure explains a proton-pumping mechanism and the high activity of family-C heme-copper oxidases compared to that of families A and B (Buschmann et al., 2010Lee et al., 2012). A small subunit of 36 aas and 1 TMS, CcoM, was identified in the structure and plays a role in assembly and stability (Kohlstaedt et al. 2016; Carvalheda and Pisliakov 2017). CcoQ, another small protein of 62 aas (acc # F8H837) is an assembly factor for Cbb3-1 and Cbb3-2 (Kohlstaedt et al. 2017). The A-, B- and C-type oxygen reductases each have an active-site tyrosine that forms a unique cross-linked histidine-tyrosine cofactor. In the C-type oxygen reductases (also called cbb3 oxidases), this post-translationally generated co-factor occurs in a different TMS than for the A- and B-type reductases (Hemp et al. 2006).

Accession Number:H7F0T0
Protein Name:Cbb3-type cytochrome c oxidase subunit I
Length:474
Molecular Weight:52789.00
Species:Pseudomonas stutzeri ATCC 14405 = CCUG 16156 [32042]
Number of TMSs:12
Substrate hydron, proton

Cross database links:

References (1)

[1] “Draft Genome of Pseudomonas stutzeri Strain ZoBell (CCUG 16156), a Marine Isolate and Model Organism for Denitrification Studies.”  Pena A.et.al.   22328767

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MNTATSTAYS YKVVRQFAIM TVVWGIVGMG LGVFIAAQLA WPFLNFDLPW TSFGRLRPLH 
61:	TNAVIFAFGG CALFATSYYS VQRTCQTTLF APKLAAFTFW GWQLVILLAA ISLPLGFTSS 
121:	KEYAELEWPI DILITIVWVA YAVVFFGTLA KRKVKHIYVG NWFFGAFILT VAILHVVNNL 
181:	EIPVTAMKSY SLYAGATDAM VQWWYGHNAV GFFLTAGFLG IMYYFVPKQA ERPVYSYRLS 
241:	IVHFWALITV YIWAGPHHLH YTALPDWAQS LGMVMSLILL APSWGGMING MMTLSGAWHK 
301:	LRSDPILRFL VVSLAFYGMS TFEGPMMAIK TVNALSHYTD WTIGHVHAGA LGWVAMVSIG 
361:	ALYHLVPKVF GREQMHSIGL INTHFWLATI GTVLYIASMW VNGIAQGLMW RAINDDGTLT 
421:	YSFVESLEAS HPGFVVRMIG GAIFFAGMLV MAYNTWRTVQ AAKPAEYDAA AQIA