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3.D.4.2.1
Cytochrome ba3 oxidase, CbaABC or CcO. The 3-d structure is known (PDB# 1EHK) (Lee et al., 2012). Proton transfer has been reviewed (von Ballmoos et al., 2012). A mutation in subunit A, D372I, a probable pump H+ binding site, uncouples H+ transport from electron flow (von Ballmoos et al. 2015). In this cytochrome ba3, O2 molecules that arrive at the reduction site diffuse through the X-ray-observed tunnel, supporting its role as the main O2 delivery pathway in this cytochrome ba3 as well as the cytokchrome aa3 of Rhodobacter spheroides (Mahinthichaichan et al. 2018). The proton loading site cluster in the ba3 cytochrome c oxidase that loads and traps protons has been identified (Cai et al. 2020).

Accession Number:P82543
Protein Name:Cytochrome c oxidase polypeptide 2A
Length:34
Molecular Weight:3767.00
Species:Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) [300852]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell membrane1 / Single-pass membrane protein2
Substrate hydron, dioxygen

Cross database links:

Entrez Gene ID: 3168186   
Pfam: PF08113   
KEGG: ttj:TTHA1133   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0070469 C:respiratory chain
GO:0004129 F:cytochrome-c oxidase activity
GO:0022900 P:electron transport chain

References (2)

[1] “Primary structure of a novel subunit in ba3-cytochrome oxidase from Thermus thermophilus.”  Soulimane T.et.al.   11152118
[2] “Structure and mechanism of the aberrant ba3-cytochrome c oxidase from Thermus thermophilus.”  Soulimane T.et.al.   10775261
Structure:
1EHK   1XME   2QPD   2QPE   3BVD   3EH3   3EH4   3EH5   3QJQ   3QJR   [...more]

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MEEKPKGALA VILVLTLTIL VFWLGVYAVF FARG