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3.D.4.2.1
Cytochrome ba3 oxidase, CbaABC or CcO. The 3-d structure is known (PDB# 1EHK) (Lee et al., 2012). Proton transfer has been reviewed (von Ballmoos et al., 2012). A mutation in subunit A, D372I, a probable pump H+ binding site, uncouples H+ transport from electron flow (von Ballmoos et al. 2015). In this cytochrome ba3, O2 molecules that arrive at the reduction site diffuse through the X-ray-observed tunnel, supporting its role as the main O2 delivery pathway in this cytochrome ba3 as well as the cytokchrome aa3 of Rhodobacter spheroides (Mahinthichaichan et al. 2018). The proton loading site cluster in the ba3 cytochrome c oxidase that loads and traps protons has been identified (Cai et al. 2020).

Accession Number:Q5SJ79
Protein Name:CbaA
Length:562
Molecular Weight:62528.00
Species:Thermus thermophilus [300852]
Number of TMSs:13
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate hydron, dioxygen

Cross database links:

RefSeq: YP_144401.1   
Entrez Gene ID: 3168993   
Pfam: PF00115   
BioCyc: TTHE300852:TTHA1135-MONOMER   
KEGG: ttj:TTHA1135   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0070469 C:respiratory chain
GO:0004129 F:cytochrome-c oxidase activity
GO:0009055 F:electron carrier activity
GO:0020037 F:heme binding
GO:0009060 P:aerobic respiration
GO:0022900 P:electron transport chain
GO:0015992 P:proton transport

References (3)

[1] “Molecular genetic and protein chemical characterization of the cytochrome ba3 from Thermus thermophilus HB8.”  Keightley J.A.et.al.   7657607
[2] “Evidence for a copper-coordinated histidine-tyrosine cross-link in the active site of cytochrome oxidase.”  Buse G.et.al.   10338009
[3] “Structure and mechanism of the aberrant ba3-cytochrome c oxidase from Thermus thermophilus.”  Soulimane T.et.al.   10775261
Structure:
1EHK   2QPD   2QPE   3BVD   3EH3   3EH4   3EH5   3QJQ   3QJR   3QJS   [...more]

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MAVRASEISR VYEAYPEKKA TLYFLVLGFL ALIVGSLFGP FQALNYGNVD AYPLLKRLLP 
61:	FVQSYYQGLT LHGVLNAIVF TQLFAQAIMV YLPARELNMR PNMGLMWLSW WMAFIGLVVA 
121:	ALPLLANEAT VLYTFYPPLK GHWAFYLGAS VFVLSTWVSI YIVLDLWRRW KAANPGKVTP 
181:	LVTYMAVVFW LMWFLASLGL VLEAVLFLLP WSFGLVEGVD PLVARTLFWW TGHPIVYFWL 
241:	LPAYAIIYTI LPKQAGGKLV SDPMARLAFL LFLLLSTPVG FHHQFADPGI DPTWKMIHSV 
301:	LTLFVAVPSL MTAFTVAASL EFAGRLRGGR GLFGWIRALP WDNPAFVAPV LGLLGFIPGG 
361:	AGGIVNASFT LDYVVHNTAW VPGHFHLQVA SLVTLTAMGS LYWLLPNLTG KPISDAQRRL 
421:	GLAVVWLWFL GMMIMAVGLH WAGLLNVPRR AYIAQVPDAY PHAAVPMVFN VLAGIVLLVA 
481:	LLLFIYGLFS VLLSRERKPE LAEAPLPFAE VISGPEDRRL VLAMDRIGFW FAVAAILVVL 
541:	AYGPTLVQLF GHLNPVPGWR LW