3.A.1.23.4 The NikM2 (230 aas; 5 TMSs)/NikN2 (110 aas; 2 TMSs) pair is part or all of a nickel transporter. The crystal structure of NikM2 is known (PDB 4M5C; 4M58). It possesses an additional TMS at its N-terminal region not present on other ECF transporter of known structure, resulting in
an extracellular N-terminus. The highly conserved N-terminal loop
inserts into the center of NikM2 and occludes a region corresponding
to the substrate-binding sites of the vitamin-specific S component. Nickel binds to NikM2 by coordination to four nitrogen atoms in Met1, His2 and His67. These nitrogens form a square-planar geometry, similar to that of the metal ion-binding sites in the amino-terminal Cu2+- and Ni2+-binding (ATCUN) motif (Yu et al. 2013). Constituents other than NikN2 and NikM2 are not known but may be required for activity (T. Eitinger, personal communication).
|
Accession Number: | Q8R9C0 |
Protein Name: | Cobalamin biosynthesis protein CbiM |
Length: | 230 |
Molecular Weight: | 24283.00 |
Species: | Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) [273068] |
Number of TMSs: | 5 |
Substrate |
nickel(2+) |
---|
1: MHIPEGYLSP QTCAVMGAAM VPVLTVAAKK VNKSFDKKDV PAMAIGSAFA FTIMMFNVPI
61: PGGTTAHAIG ATLLATTLGP WAASISLTLA LFIQALLFGD GGILALGANS FNMAFIAPFV
121: GYGIYRLMLS LKLNKVLSSA IGGYVGINAA ALATAIELGL QPLLFHTANG TPLYFPYGLN
181: VAIPAMMFAH LTVAGIVEAV ITGLVVYYLQ KVDEENILHK FSYRLRGDNR