TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.2.1.8
The inward rectifier potassium channel 13, Kir 7.1, Kir1.4, or KCNJ13, of 360 aas and 2 TMSs. A splice variant expressed in mouse tissues shares organisational and functional properties with human leber amaurosis-causing mutations of this channel (Vera et al. 2019). In fact, mutations in KCNJ13 are associated with two retinal disorders; Leber congenital amaurosis (LCA) and snowflake vitreoretinal degeneration (SVD) (Toms et al. 2019). Pinacidil is a channel opener (Sun et al. 2019). It may play a role in the control of polyamine-mediated channel gating and in the blocking by intracellular magnesium. A Kir7.1 disease mutant T153I within the inner pore affects K+ conduction (Beverley et al. 2022). Kir7.1 exhibits small unitary conductance and low dependence on external potassium. Kir7.1 channels also show a phosphatidylinositol 4,5-bisphosphate (PIP(2)) dependence for opening (Hernandez et al. 2023). Retinopathy- associated Kir7.1 mutations map at the binding site for PIP(2), resulting in channel gating defects, leading to channelopathies such as snowflake vitreoretinal degeneration and Leber congenital amaurosis in blind patients. These properties may be due to its unusual structure (Hernandez et al. 2023).  

Accession Number:O60928
Protein Name:Inward rectifier potassium channel 13 aka Kir7.1
Length:360
Molecular Weight:40530.00
Species:Homo sapiens (Human) [9606]
Number of TMSs:3
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate potassium(1+)

Cross database links:

RefSeq: NP_001165887.1    NP_001165888.1    NP_002233.2   
Entrez Gene ID: 3769   
Pfam: PF01007   
OMIM: 193230  phenotype
603208  gene
KEGG: hsa:3769   

Gene Ontology

GO:0008076 C:voltage-gated potassium channel complex
GO:0005242 F:inward rectifier potassium channel activity
GO:0006813 P:potassium ion transport

References (5)

[1] “Cloning and characterization of a novel human inwardly rectifying potassium channel predominantly expressed in small intestine.”  Partiseti M.et.al.   9738472
[2] “A novel inward rectifier K+ channel with unique pore properties.”  Krapivinsky G.et.al.   9620703
[3] “The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).”  The MGC Project Teamet.al.   15489334
[4] “Partial gene structure and assignment to chromosome 2q37 of the human inwardly rectifying K+ channel (Kir7.1) gene (KCNJ13).”  Derst C.et.al.   9878260
[5] “Mutations in KCNJ13 cause autosomal-dominant snowflake vitreoretinal degeneration.”  Hejtmancik J.F.et.al.   18179896

External Searches:

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MDSSNCKVIA PLLSQRYRRM VTKDGHSTLQ MDGAQRGLAY LRDAWGILMD MRWRWMMLVF 
61:	SASFVVHWLV FAVLWYVLAE MNGDLELDHD APPENHTICV KYITSFTAAF SFSLETQLTI 
121:	GYGTMFPSGD CPSAIALLAI QMLLGLMLEA FITGAFVAKI ARPKNRAFSI RFTDTAVVAH 
181:	MDGKPNLIFQ VANTRPSPLT SVRVSAVLYQ ERENGKLYQT SVDFHLDGIS SDECPFFIFP 
241:	LTYYHSITPS SPLATLLQHE NPSHFELVVF LSAMQEGTGE ICQRRTSYLP SEIMLHHCFA 
301:	SLLTRGSKGE YQIKMENFDK TVPEFPTPLV SKSPNRTDLD IHINGQSIDN FQISETGLTE