TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.84.1.10
CALHM1 of 346 aas and 4 or 5 TMSs.  A  cryo-EM structure of full-length Ca2+-free CALHM1 from Danio rerio at an overall resolution of 3.1 Å has been published (Ren et al. 2020). The structure reveals an octameric architecture with a wide pore diameter of ~20 Å, presumably representing the active conformation. The structure is substantially different from that of the isoform CALHM2, which forms both undecameric hemichannels and gap junctions. The N-terminal small helix folds back to the pore and forms an antiparallel interaction with TMS 1. Structural analysis revealed that the extracellular loop 1 region within the dimer interface may contribute to oligomeric assembly. A positive potential belt inside the pore was identified that may modulate ion permeation (Ren et al. 2020).

Accession Number:E7F2J4
Protein Name:Calcium homeostasis modulator 1
Length:346
Molecular Weight:39749.00
Species:Danio rerio (Zebrafish) [7955]
Number of TMSs:4
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate ion, ATP

Cross database links:

External Searches:

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MDKFRIMVQF LQANQESFMN GICGIMALAS AQMYSSFEFT CPCLPDYNYA YGIGILIVPP 
61:	IWFFLLGYVM NNNISVLTEE WKRPVGKRSK DPAVLRYMFS SMTQRALIAP AVWIAVTLMD 
121:	GKSFLCAFSP TADLSEFVNE SYQSLSQKEL LKIQAKIPCK DIFEEHEIIS REAATRYIRC 
181:	LSQACGWTFL MVITLVAFLV RAIRPCFTQA AFLKTKYWSH YIDTERKLFD ETCKEHAKSF 
241:	AKVCIQQYFE SISGEIVSQL PQSPAKKGKG NKDEDGEKQK SDEERLLGIR KEGDMNKVLW 
301:	NWHTCKPPLL LSKRTEEMNG HAHLDTHSLT DERHTKKKAV VYYSKV