1.A.84.1.9 Killifish CALHM1 of 351 aas and 5 TMSs in a 2 + 2 + 1 TMS arrangement. The cryoEM structure has been determined to 2.66 Å resolution (Demura et al. 2020). The human CALHM-2 (CALMH2) and the C. elegans CLHM-1 (CLHM1) were also solved at lower resolution. The CALHM1 octameric structure reveals that the N-terminal helix forms the constriction site at the channel pore in the open state and modulates the ATP conductance. The CALHM2 undecamer and CLHM-1 nonamer structures show the different oligomeric stoichiometries among CALHM homologs. The cryo-EM structures of the chimeric construct revealed that the intersubunit interactions in the transmembrane region and the TMS-intracellular domain linker define the oligomeric stoichiometry (Demura et al. 2020).
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Accession Number: | H2MCM1 |
Protein Name: | Uncharacterized protein |
Length: | 351 |
Molecular Weight: | 40485.00 |
Species: | Oryzias latipes (Japanese rice fish) [8090] |
Number of TMSs: | 5 |
Location1 / Topology2 / Orientation3: |
Membrane1 / Multi-pass membrane protein2 |
Substrate |
ion, ATP |
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1: MDKFRMMFQF LQSNQESFMN GICGIMALAS AQMYSSFEFS CPCMPEYNYT YGIGLLIIPP
61: IWFFLLGFVL NNNVSVLAEE WKRPTGRRTK DPSVLRYMLC SITQRSLIAP AVWVSVTLMD
121: GKSFLCAFSI NLDIEKFGNA SLVIGMTETE KLKFLARIPC KDLFEDNEVR VAATRYIKCI
181: SQACGWMFLL MMTFTAFLIR AIRPCFTQAA FLKTKYWSHY IDIERKMFDE TCKEHAKSFA
241: KVCIHQYFEN ISGEMQNFHR HQSKDTSDAE EEEKQRSDED KLLGIKAQED MNKVLWNWHT
301: CKPALALRKD HLDTESNGKL NGTMNGAVNG FAQGHTHDVA KKEWAVYYSK V