| TCID | Name | Domain | Kingdom/Phylum | Protein(s) |
|---|---|---|---|---|
|
1.B.93.1.1 | YiaT putative porin of 246 aas and 10 putative TM β-strands (Yang et al., 2011). | Bacteria |
Proteobacteria | YiaT of E. coli (P37681) |
|
1.B.93.1.2 | MipA (YeaF) (Vollmer et al., 1999). This outer membrane protein of 248 aas and 10 TM β-strands is involved in antibiotic resistance (Li et al. 2015). It is also an MltA (outer membrane lytic transglycosylase (P0A935))-interacting protein (van Straaten et al. 2005; Vollmer et al. 1999). | Bacteria |
Proteobacteria | MipA of E. coli (P0A908) |
|
1.B.93.1.3 | The putative outer membrane scaffolding protein for murein-synthesizing holoenzyme of 245 aas and 10 putative TM β-strands, MipA. Resembles several porins. | Bacteria |
Proteobacteria | MipA of Pseudoalteromonas haloplanktis |
|
1.B.93.1.4 | N-terminal DUF2141 domain/C-terminal MipA domain protein. The N-terminal domain may be an artifactual fusion of a full length DUF2141 domain with a full length putative C-terminal porin domain, but this seems less likely since the same fusion has been observed in another family member (TC# 1.B.93.2.8). | Bacteria |
Proteobacteria | DUF2141 homologue of Desulfurivibrio alkaliphilus (D6Z2E5) |
|
1.B.93.1.5 | Outer membrane protein, OmpV | Bacteria |
Proteobacteria | OmpV of Vibrio parahaemolyticus |
|
1.B.93.1.6 | Uncharacterized protein of 282 aas and 10 predicted β-strands. | Bacteria |
Proteobacteria | UP of Geobacter lovleyi |
|
1.B.93.1.7 | MipA,OmpV family protein of 295 aas and one N-terminal TMS. | Bacteria |
Proteobacteria | MipA of Thalassotalea euphylliae |
|
1.B.93.1.8 | MipA/OmpV family protein of 248 aas and 1 N-terminal TMS. | Bacteria |
Proteobacteria | MipA of Thiofilum flexile |
|
1.B.93.1.9 | MipA/OmpV family protein of 253 aas and 1 N-terminal TMS. | Bacteria |
Proteobacteria | MipA of unclassified Herbaspirillum |
|
1.B.93.1.10 | MipA/OmpV family protein of 276 aas and 1 N-terminal TM | Bacteria |
Proteobacteria | MipA of Cellvibrio mixtus |
|
1.B.93.1.11 | MipA/OmpV family protein of 286 aa | Bacteria |
Fusobacteria | MipA of Fusobacterium nucleatum |
|
1.B.93.1.12 | MipA family protein of 429 aa | Bacteria |
Proteobacteria | MipA of Ferrimonas kyonanensis |
|
1.B.93.1.13 | MipA/OmpV family protein of 275 aa | Bacteria |
Proteobacteria | MipA of Niveispirillum cyanobacteriorum |
|
1.B.93.1.14 | Uncharacterized protein of 295 aas [Candidatus Muproteobacteria bacterium | Bacteria |
Proteobacteria | UP of Candidatus Muproteobacteria bacterium |
|
1.B.93.2.1 | Uncharacterized DUF2141 protein of 153 aas. This protein is homologous only to the N-terminal domain in 9.B.99.1.4, but no other members of subfamily 9.B.99.1. It is therefore not homologous to other members of subfamily 9.B.99.1. The N-terminal domain of 9.B.99.1.4 may be artifactual. | Bacteria |
Cyanobacteria | UP of Calothrix sp. PCC 6303 |
|
1.B.93.2.2 | Uncharacterized DUF2141 protein of 157 aas. This protein is homologous to the N-terminal domain in 9.B.99.1.4, but not to other members of subfamily 9.B.99.1. The N-terminal domain of 9.B.99.1.4 may be a fusion of a DUF2141 domain with a putative C-terminal porin domain of the MipA type, distant from other proteins listed in subfamily 1.B.93.1. | Bacteria |
Bacteroidetes/Chlorobi group | UP of Chlorobium tepidum |
|
1.B.93.2.3 | DUF2141 domain-containing protein of 249 aas and 1 central TMS. | Bacteria |
Proteobacteria | DUF2141 protein of Brevundimonas sp. |
|
1.B.93.2.4 | Uncharacterized DUF2141 protein of 138 aas and one N-terminal TMS. | Bacteria |
Bacteroidetes | UP of Psychroflexus sediminis |
|
1.B.93.2.5 | Uncharacterized conserved protein, DUF2141 family, 175 aas and 1 C-terminal TMS. | Bacteria |
Proteobacteria | UP of Cribrihabitans marinus |
|
1.B.93.2.6 | DUF2141 domain-containing protein of 161 aas and 1 N-terminal TMS | Bacteria |
Proteobacteria | DUF2141 domain protein of Henriciella algicola |
|
1.B.93.2.7 | Uncharacterized protein (DUF2141 family) of 264 aa | Bacteria |
Proteobacteria | UP of Rhodothalassium salexigens |
|
1.B.93.2.8 | Uncharacterized fatty acid hydroxylase domain protein of 711 aas and 7 TMSs in a 6 + 1 TMS arrangement. This protein has three domains, first an integral membrane fatty acid hydroxylase domain, second, a DUF2141 domain, and third, a MipA domain with an N-terminal TMS. The protein with TC# 1.B.93.1.4 has the latter two domains fused together in the same order as for this protein. | Eukaryota |
Metazoa | UP of Diploscapter pachys |
|
1.B.93.2.9 | Uncharacteerized DUF2141 protein of 171 aas and 1 N-terminal TMS | Bacteria |
Proteobacteria | UP of Sphingopyxis indica |
|
1.B.93.3.1 | Uncharacterized protein conserved in bacteria (DUF2141) of 708 aas. | Bacteria |
Bacteroidetes | UP of Prevotella denticola |
|
1.B.93.3.2 | DUF2141 domain-containing protein of 623 aas. Residues 513 - 583 in this protein align with residues 36 - 105 of TC# 1.B.93.2.2 with 31% identity. The latter protein has a 157 aa DUF2141 domain with an N-terminal TMS. | Bacteria |
Bacteroidetes | DUF2141 protein of Odoribacter splanchnicus |
|
1.B.93.3.3 | Uncharacterized DUF2141 protein of 609 aas and one N-terminal TMS. | Bacteria |
Bacteroidetes | UP of Elizabethkingia meningoseptica (Chryseobacterium meningosepticum) |