TCDB is operated by the Saier Lab Bioinformatics Group
TCIDNameDomainKingdom/PhylumProtein(s)
9.A.52.1.1









Microcin J25 (MccJ25) cyclic 21 aa peptide, derived from a precursor of 58 aas. The Ile13 residue of microcin J25 is essential for recognition by the receptor FhuA, but not by the inner membrane transporter SbmA (Socias et al., 2009). It inhibits transcription by binding deep within RNAP secondary channel, where it sterically blocks the folding of the trigger loop, which is essential for efficient catalysis (Mukhopadhyay et al. 2004; Braffman et al. 2019). It also acts on the cytoplasmic membrane of Salmonella newport, producing alteration of membrane permeability and subsequent gradient dissipation, which inhibits several processes essential for cell viability, such as oxygen consumption (Rintoul et al. 2001).

Bacteria
Pseudomonadota
Microcin J25 of E. coli (Q9X2V7)
9.A.52.1.2









Citrocin of 19 aas

Bacteria
Pseudomonadota
Citrocin of Citrobacter pasteurii
9.A.52.1.3









Cloacaenodin of 24 aas

Bacteria
Pseudomonadota
Cloacaenodin of Enterobacter hormaechei
9.A.52.1.4









Klebsidin of 19 aas (similar in sequence to other lasso peptides), but derived from a protein of 45 aas, Pre-klebsidin, listed here.

Bacteria
Pseudomonadota
Klebsidin of Klebsiella pneumoniae
9.A.52.1.5









Capistruin of 19 aas, but derived from a larger pepdide as are all of the lasso peptides that exhibit anti-microbial activity.

Bacteria
Pseudomonadota
Capistruin of Burkholderia
9.A.52.1.6









Pre-capistruin of 47 aas.  This precursor is processed to capistruin (TC# 9.A.52.1.5)

Bacteria
Pseudomonadota
Pre-capistruin of Burkholderia