1.B.81 The DUF2490 Putative Beta Barrel Porin (DUF2490) Family

The DUF2490 family consists of Gram negative bacterial proteins, mostly from Proteobacteria and Bacteroidetes, of about 210 to 280 aas and usually 10 - 12 putative beta strands in a probable beta-barrel as predicted with PRED-TMBB.  These proteins show sequence similarity to members of 1.B.35.2 and therefore probably belong to Porin Superfamily I.  On this basis, they are assumed to be porins even though there is no direct experimental evidence to prove it.



This family belongs to the Outer Membrane Pore-forming Protein I (OMPP-I) Superfamily .

Examples:

TC#NameOrganismal TypeExample
1.B.81.1.1

DUF 2490 domain protein of 228 aas

Bacteroidetes

DUF2490 porin of Nonlabens dokdonensis

 
1.B.81.1.10

Uncharacterized protein of 238 aas

UP of Chryseobacterium indologenes

 
1.B.81.1.11

DUF2940 protein of 220 aas

UP of Nonlabens dokdonensis (Donghaeana dokdonensis)

 
1.B.81.1.12

Uncharacterized protein of 246 aas

UP of Mariniradius saccharolyticu

 
1.B.81.1.13

Uncharacterized protein of 219 aas

UP of Fluviicola taffensis

 
1.B.81.1.14

Uncharacterized DUF2490 domain-containing protein of 241 aas

UP of Methylosarcina fibrata

 
1.B.81.1.15

Uncharacterized protein of 234 aas

UP of Sphingomonas sanxanigenens

 
1.B.81.1.16

Uncharacterized protein of 350 aas, one N-terminal α-TMS and 12 predicted β-TMSs

UP of Nitrosomonas sp. (strain Is79A3)

 
1.B.81.1.2

Putative porin of 230 aas

Bacteroidetes

PP of Pedobacter saltans

 
1.B.81.1.3

Putative porin of 221 aas

Proteobacteria

PP of Spingobium indicum

 
1.B.81.1.4

Putative porin of 228 aas

Proteobacteria

PP of Methylobacterium populi

 
1.B.81.1.5

Uncharacterized protein of 253 aas

UP of Owenweeksia hongkongensis

 
1.B.81.1.6

Uncharacterized protein of 244 aas

UP of Cellulophaga algicola

 
1.B.81.1.7

Uncharacterized protein of 254 aas

UP of Runella slithyformis

 
1.B.81.1.8

Uncharacterized protein of 244 aas

UP of Haliscomenobacter hydrossis

 
1.B.81.1.9

Uncharacterized protein of 222 aas

UP of Legionella oakridgensis

 
Examples:

TC#NameOrganismal TypeExample
1.B.81.2.1

Uncharacterized protein of 223 aas

UP of a Chlorobium species

 
1.B.81.2.2

Uncharacterized DUF2490 domain-containing protein of 237 aas with one N-terminal α-TMS and 11 predicted β-TMSs.

UP of Bacterium 336/3