9.B.155 The Putative Beta Barrel Porin-3 (BBP3) Family

The BBP3 family is represented in Chlamydia and Proteobacteria.  These proteins are of about 300 aas and have 8 - 10 probable beta strands. Limited sequence similarity was found between one member (9.B.155.1.3) and a member of the FadL family (1.B.9.1.1).


Examples:

TC#NameOrganismal TypeExample
9.B.155.1.1

Putative porin of 308 aas.

Chlamidiae

Porin of Parachlamydia acanthamoebae

 
9.B.155.1.2

Uncharacterized protein of 300 aas

Proteobacteria

UP of Roseobacter litoralis

 
9.B.155.1.3

Putative FadL homologue of 311 aas

Proteobacteria

FadL homologue of Shewanella oneidensis

 
9.B.155.1.4

Uncharacterized protein of 283 aas

Proteobacteria

UP of Thiocystis violascens

 
9.B.155.1.5

Putative porin

Proteobacteria

Putative porin of Desulfocapsa sulfexigens

 
9.B.155.1.6

FadL homologue

Chlamydiae

FadL homologue of Chlamydia trachomatis

 
Examples:

TC#NameOrganismal TypeExample
9.B.155.2.1

Uncharacterized protein of 329 aas

Proteobacteria

UP of Desulfovibrio magneticus

 
9.B.155.2.10

Uncharacterized protein of 296 aas

Verrucomicrobia

UP of Opitutus terrae

 
9.B.155.2.11

Uncharacterized protein of 300 aas

Bacteroidetes

UP of Nonlabens dokdonensis

 
9.B.155.2.12

Uncharacterized protein of 328 aas

Proteobacteria

UP of Corallococcus coralloides

 
9.B.155.2.13

Uncharacterized protein of 317 aas

Bacteroidetes

UP of Dyadobacter fermentans

 
9.B.155.2.14

Uncharacterized protein of 322 aas

Planctomcetes

UP of Planctomyces brasiliensis

 
9.B.155.2.15

Uncharacterized protein of 344 aas

Proteobacteria

UP of Sorangium cellulosum

 
9.B.155.2.16

Uncharacterized protein of 389 aas

Bacteroidetes

UP of Psychroflexus torquis

 
9.B.155.2.17

Uncharacterized protein of 277 aas

Bacteroidetes

UP of Floavobacterium johnsoniae

 
9.B.155.2.18

Uncharacterized protein of 283 aas

Bacteroidetes

UP of Muricauda ruestringensis

 
9.B.155.2.2

Uncharacterized protein of 316 aas

Bacteroidetes

UP of Chilinophaga pinensis

 
9.B.155.2.3

Uncharacterized protein of 236 aas

Bacteroidetes

UP of Leadbetterella byssophila

 
9.B.155.2.4

Uncharacterized protein of 322 aas

Bacteroidetes

UP of Provotella intermedia

 
9.B.155.2.5

Uncharacterized protein of 299 aas

Bacteroidetes

UP of Dyadobacter fermentans

 
9.B.155.2.6

Uncharacterized protein of 282 aas

Bactereoidetes

UP of Croceibacter atlanticus

 
9.B.155.2.7

Uncharacterized protein of 341 aas

Bacteroidetes

UP of Myroides odoralimimus

 
9.B.155.2.8

Uncharacterized protein of 292 aas

Proteobacteria

UP of Desulfovibrio salexigens

 
9.B.155.2.9

Uncharacterized protein of 286 aas

Proteobacteria

UP of Desulfohalobium retbaense

 
Examples:

TC#NameOrganismal TypeExample
9.B.155.3.1

Uncharacterized protein of 330 aas

Proteobacteria

UP of Desulfurculus baarsii

 
9.B.155.3.2

Uncharacterized protein of 362 aas

Planctomycetes

UP of Phycisphaera mikurensis

 
9.B.155.3.3

Uncharacterized protein of 328 aas

Proteobacteria

UP of Bacteriovorax marinus

 
9.B.155.3.4

Uncharacterized protein of 328 aas

Proteobacteria

UP of Bdellovibrio bacteriovorus

 
9.B.155.3.5

Uncharacterized protein of 446 aas

Planctomycetes

UP of Pirellula staleyi