TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.6.2.31
Multidrug efflux pump, SdeAB-HasF (mediates fluoroquinolone efflux) (Begic and Worobec, 2008) (HasF is > 60% identical to TolC of E. coli (1.B.17.1.1))

Accession Number:Q84GI9
Protein Name:SdeB
Length:1047
Molecular Weight:112503.00
Species:Serratia marcescens subsp. marcescens [211759]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Nucleus1
Substrate fluoroquinolone antibiotic

Cross database links:

Pfam: PF00873   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005215 F:transporter activity
GO:0051301 P:cell division
GO:0006810 P:transport

References (1)

[1] “Cloning, sequencing, and characterization of the SdeAB multidrug efflux pump of Serratia marcescens.”  Kumar A.et.al.   15793131

External Searches:

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MDFSRFFIDR PIFAAVLSIL IFVAGVIAIP LLPISEYPDV VPPSVQVRAE YPGANPKEIA 
61:	ETVATPLEEA INGVENMMYM KSVAGSDGVL VTTVTFRPGT DPDQAQVQVQ NRVAQAEARL 
121:	PEDVRRQGIT TQKQSPALTL VVHLVSPSGK YDSLYLRNYA TLKVKDELAR LPGVGQVQIF 
181:	GAGEYAMRIW LDPNKVAARG LTASDVVSAM QEQNVQVSAG QLGAEPMPTR SDYLLSINAQ 
241:	GRLQTEEEFG NIILKSGDNG EIVRLRDVAR IEMGSGSYAL RAQLNNKDAV GIGIFQSPGA 
301:	NAIELSDAVR GKMAELATRF PDGMSWKSPY DPTVFVRDSI RAVVDTLLEA VILVVLVVIL 
361:	FLQTWRASII PLLAVPISVV GTFAALYLLG FSLNTLSLFG LVLAIGIVVD DAIVVVENVE 
421:	RNIEEGLSPL AAAHQAMREV SGPIIAIAVV LCAVFVPMAF LSGVTGQFYK QFAVTIAIST 
481:	VISAINSLNL SPALAARLLK PHGAPKDMPS RLIDRLFGWL FRPFNRFFAS GSQRYQRGVS 
541:	RVLGRRGAVF IVYLLLLAAA GVMFKTVPGG FIPTQDKLYL IGGVKMPEGA SLERTDAVIR 
601:	KMSAIGMSVD GVTDAVAFPG LNALQFTNTP NTGTVFFALE SLSTRTRTAA QINAEINARI 
661:	SQIQEGFAFS IMPPPILGIG QGSGYSLYVQ DRGGLGYGAL QTAINTMSGA IMQTPGMGFP 
721:	ISSYQANVGQ RDAKIDRDKA KAQGVPLNAL FSTLQTYLGS SYINDFNRYG RTWKVMAQAD 
781:	AQFRDSVEDI ANLRTRNDKG EMVPIGSMVS IGTTYGPDPV IRYNGFPAAD LIGDADPRVL 
841:	SSTQAMGALT QMADKLLPNG MNIQWTDLSY QQSTQGNAAL VVFPVAVLLA FLALAALYES 
901:	WTLPLAVILI VPMTMLSALF GVWLTGGDNN VFVQVGLVVL MGLACKNAIL IVEFARELEM 
961:	QGKGIVEAAL EACRLRLRPI VMTSIAFIAG TIPLILGHGA GAEVRGVTGI TVFSGMLGVT 
1021:	LFGLFLTPVF YVTLRRLVAR KAQPQTA